Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNORA27-201ENST00000384323 126 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 AL160004.2-201ENST00000432935 350 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 AC098614.3-201ENST00000438957 440 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 MIR18B-201ENST00000454574 71 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.1□□□□□ -2.39
CCDC88CQ9P219 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.1□□□□□ -2.39
CCDC88CQ9P219 SNORD92-201ENST00000585078 85 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.58-201ENST00000362807 102 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.66-201ENST00000362862 102 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.154-201ENST00000363624 102 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 SNORD45.3-201ENST00000363836 72 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 RNY3P1-201ENST00000365085 102 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 RNY3-201ENST00000365484 102 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 RNU6-144P-201ENST00000383951 107 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.423-201ENST00000384057 113 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 RNU6-926P-201ENST00000384075 107 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.551-201ENST00000384661 102 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
CCDC88CQ9P219 AL590004.1-201ENST00000405321 300 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 RNU6-121P-201ENST00000410525 99 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.617-201ENST00000410920 90 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.631-201ENST00000459607 101 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 AC091959.1-201ENST00000495857 238 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 AC108740.1-201ENST00000498629 225 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 SNORA31.14-201ENST00000516728 116 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 AC138869.1-201ENST00000568623 124 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 MIR4771-2-201ENST00000577758 74 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 MIR4491-201ENST00000581087 68 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 MIR4802-201ENST00000581881 80 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 MIR4771-1-201ENST00000582617 74 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 SNORD113-5-201ENST00000607261 78 ntBASIC0.09□□□□□ -2.39
CCDC88CQ9P219 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.09□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.31-201ENST00000362574 102 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 RNU6-1099P-201ENST00000363533 107 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.230-201ENST00000364348 109 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.634-201ENST00000364811 113 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 RNU5E-4P-201ENST00000364931 120 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 RNU6-1040P-201ENST00000383974 107 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.450-201ENST00000384198 113 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 SNORD63-201ENST00000384262 68 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 MIR628-201ENST00000385229 95 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 RNU6-763P-201ENST00000390865 106 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 MIR1265-201ENST00000408444 86 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.621-201ENST00000411065 96 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 SNORD71-201ENST00000411292 86 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 MTCO1P5-201ENST00000433573 344 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 RBMX2P4-201ENST00000441256 376 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.09□□□□□ -2.4
CCDC88CQ9P219 RNU7-156P-201ENST00000517214 74 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 AC008608.1-201ENST00000603910 127 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 MIR548AY-201ENST00000617669 107 ntBASIC0.09□□□□□ -2.4
CCDC88CQ9P219 RNU6-1115P-201ENST00000362490 106 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.44-201ENST00000362676 108 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU4-10P-201ENST00000364383 140 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 U8.5-201ENST00000364528 136 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-1264P-201ENST00000383891 107 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.419-201ENST00000384041 102 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-308P-201ENST00000390957 107 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.632-201ENST00000459189 102 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU7-110P-201ENST00000516891 62 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RN7SKP295-201ENST00000517264 153 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 MIR4724-201ENST00000579485 89 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 AL049861.1-201ENST00000603130 150 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 AC092447.9-201ENST00000603395 144 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.39-201ENST00000362620 98 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU4-90P-201ENST00000362773 141 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 SNORD118-201ENST00000363593 134 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.252-201ENST00000364556 101 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.351-201ENST00000365436 96 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-597P-201ENST00000365620 102 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNY3P14-201ENST00000384309 102 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.527-201ENST00000384573 102 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-310P-201ENST00000384655 107 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-535P-201ENST00000384722 107 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-938P-201ENST00000411285 103 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 SNORD83.1-201ENST00000411362 77 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 AL512326.2-201ENST00000426359 151 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 SNRPGP8-201ENST00000454064 226 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU7-62P-201ENST00000458856 62 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.637-201ENST00000459424 114 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-998P-201ENST00000515894 101 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-507P-201ENST00000516045 100 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 RNU6-830P-201ENST00000516353 107 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.715-201ENST00000517082 110 ntBASIC0.08□□□□□ -2.4
CCDC88CQ9P219 MIR369-201ENST00000362155 70 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 RNU6-899P-201ENST00000363947 107 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.418-201ENST00000384029 102 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 RNU6-937P-201ENST00000384325 106 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 MIR559-201ENST00000385188 96 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 SNORD115-46-201ENST00000390982 71 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 SNORD100-201ENST00000408573 76 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.592-201ENST00000410274 109 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.602-201ENST00000410535 92 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 AL022718.1-201ENST00000412004 84 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms