Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRDM9Q9NQV7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.15□□□□□ -1.9
PRDM9Q9NQV7 SNORA2B-201ENST00000384583 137 ntBASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 MIR526A1-201ENST00000384897 85 ntBASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 AC087499.7-201ENST00000441958 109 ntBASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 AC090255.1-201ENST00000495779 349 ntBASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 SNORA25.13-201ENST00000516395 103 ntBASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PRDM9Q9NQV7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 MIR660-201ENST00000385235 97 ntBASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 RPL23AP6-201ENST00000446637 472 ntBASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 RN7SL601P-201ENST00000471221 293 ntBASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 AC004223.1-201ENST00000479840 271 ntBASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
PRDM9Q9NQV7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 RNU6-624P-201ENST00000363411 107 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 RNU6-478P-201ENST00000363904 110 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 RNVU1-14-201ENST00000384770 164 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 MIR1289-1-201ENST00000408836 144 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 RN7SL442P-201ENST00000473804 320 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 RNU6-557P-201ENST00000516842 110 ntBASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.13□□□□□ -1.91
PRDM9Q9NQV7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 SNORD115-3-201ENST00000363100 82 ntBASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 RNU7-43P-201ENST00000516554 64 ntBASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 SCARNA16.3-201ENST00000516595 184 ntBASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 RNU6-539P-201ENST00000516665 103 ntBASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 SNORA74.3-201ENST00000517108 154 ntBASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRDM9Q9NQV7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 RNA5SP383-201ENST00000362934 120 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 SNORA40.18-201ENST00000391200 128 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 RNU6-380P-201ENST00000410207 107 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 Z98742.3-201ENST00000418637 326 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 AC005326.1-201ENST00000429197 123 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 RN7SKP132-201ENST00000516001 208 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 RNU6-523P-201ENST00000516304 54 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 CYP3A52P-201ENST00000563326 91 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 AC105081.1-201ENST00000617727 106 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
PRDM9Q9NQV7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
PRDM9Q9NQV7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRDM9Q9NQV7 RNA5SP120-201ENST00000410900 112 ntBASIC3.1□□□□□ -1.91
PRDM9Q9NQV7 AC007179.3-201ENST00000604976 235 ntBASIC3.1□□□□□ -1.91
PRDM9Q9NQV7 AC021506.2-201ENST00000612354 169 ntBASIC3.1□□□□□ -1.91
PRDM9Q9NQV7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.1□□□□□ -1.91
PRDM9Q9NQV7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRDM9Q9NQV7 Y_RNA.57-201ENST00000362806 113 ntBASIC3.09□□□□□ -1.91
PRDM9Q9NQV7 MIR520A-201ENST00000384862 85 ntBASIC3.09□□□□□ -1.91
PRDM9Q9NQV7 BX510359.4-201ENST00000423750 193 ntBASIC3.09□□□□□ -1.91
PRDM9Q9NQV7 SNORD4B-201ENST00000459083 72 ntBASIC3.09□□□□□ -1.91
PRDM9Q9NQV7 AL512598.1-201ENST00000610158 273 ntBASIC3.09□□□□□ -1.91
PRDM9Q9NQV7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRDM9Q9NQV7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRDM9Q9NQV7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRDM9Q9NQV7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 RNU1-70P-201ENST00000362618 164 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 RNU7-153P-201ENST00000516455 62 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 AP000753.3-201ENST00000604083 169 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 AL161756.2-201ENST00000604597 246 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 MIR8066-201ENST00000617280 78 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 AC008133.2-201ENST00000624540 351 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRDM9Q9NQV7 RNU6-525P-201ENST00000363685 104 ntBASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 AL023284.1-201ENST00000403956 276 ntBASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 RNU4-47P-201ENST00000410876 114 ntBASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 snoU13.11-201ENST00000459219 104 ntBASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 RPS29P11-201ENST00000496507 171 ntBASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 AC133485.1-201ENST00000567176 124 ntBASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 MIR4709-201ENST00000577272 72 ntBASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
PRDM9Q9NQV7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 RNY1P13-201ENST00000365030 105 ntBASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 SNORA9-201ENST00000384215 133 ntBASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 MIR483-201ENST00000385070 76 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms