Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC022523.2-201ENST00000561045 150 ntBASIC3.45□□□□□ -1.86
RTN4Q9NQC3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.45□□□□□ -1.86
RTN4Q9NQC3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.45□□□□□ -1.86
RTN4Q9NQC3 AL162274.2-201ENST00000614406 332 ntBASIC3.45□□□□□ -1.86
RTN4Q9NQC3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RTN4Q9NQC3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
RTN4Q9NQC3 RNU6-1107P-201ENST00000364817 104 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 RNU6-1104P-201ENST00000384723 104 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 MIR490-201ENST00000384865 128 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 MIR144-201ENST00000384886 86 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 MIR676-201ENST00000390702 67 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RTN4Q9NQC3 AL133373.1-201ENST00000497098 94 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 MIR548AO-201ENST00000579992 96 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 MIR3944-201ENST00000581277 108 ntBASIC3.44□□□□□ -1.86
RTN4Q9NQC3 Y_RNA.171-201ENST00000363760 102 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTN4Q9NQC3 MIR1912-201ENST00000410389 80 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 RNU6-1190P-201ENST00000410811 104 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 COTL1P1-201ENST00000422309 375 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 AC027119.1-201ENST00000440877 241 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 AC005908.1-201ENST00000468701 347 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 RNA5SP281-201ENST00000516504 135 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 RNU11-2P-201ENST00000516898 142 ntBASIC3.43□□□□□ -1.86
RTN4Q9NQC3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN4Q9NQC3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RTN4Q9NQC3 AC245517.4-201ENST00000448601 281 ntBASIC3.42□□□□□ -1.86
RTN4Q9NQC3 AC009474.2-201ENST00000451383 136 ntBASIC3.42□□□□□ -1.86
RTN4Q9NQC3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC3.42□□□□□ -1.86
RTN4Q9NQC3 SNRPGP19-201ENST00000603826 189 ntBASIC3.42□□□□□ -1.86
RTN4Q9NQC3 AL137847.3-201ENST00000611521 109 ntBASIC3.42□□□□□ -1.86
RTN4Q9NQC3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTN4Q9NQC3 RNU6-396P-201ENST00000365369 105 ntBASIC3.41□□□□□ -1.86
RTN4Q9NQC3 RNU1-78P-201ENST00000391248 165 ntBASIC3.41□□□□□ -1.86
RTN4Q9NQC3 MIR1302-5-201ENST00000408164 150 ntBASIC3.41□□□□□ -1.86
RTN4Q9NQC3 HMGN1P33-201ENST00000432945 451 ntBASIC3.41□□□□□ -1.86
RTN4Q9NQC3 RNU6-947P-201ENST00000516264 106 ntBASIC3.41□□□□□ -1.86
RTN4Q9NQC3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.41□□□□□ -1.86
RTN4Q9NQC3 AC012314.7-201ENST00000619693 93 ntBASIC3.41□□□□□ -1.86
RTN4Q9NQC3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.41□□□□□ -1.86
RTN4Q9NQC3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RTN4Q9NQC3 SNORD115-19-201ENST00000363098 82 ntBASIC3.4□□□□□ -1.87
RTN4Q9NQC3 SNORD115-18-201ENST00000363293 82 ntBASIC3.4□□□□□ -1.87
RTN4Q9NQC3 SNORA63.5-201ENST00000363548 123 ntBASIC3.4□□□□□ -1.87
RTN4Q9NQC3 SNORD115-17-201ENST00000364612 82 ntBASIC3.4□□□□□ -1.87
RTN4Q9NQC3 DEFA7P-201ENST00000382676 285 ntBASIC3.4□□□□□ -1.87
RTN4Q9NQC3 MIR934-201ENST00000401241 83 ntBASIC3.4□□□□□ -1.87
RTN4Q9NQC3 AL096861.1-201ENST00000610899 123 ntBASIC3.4□□□□□ -1.87
RTN4Q9NQC3 Y_RNA.507-201ENST00000384500 99 ntBASIC3.39□□□□□ -1.87
RTN4Q9NQC3 RNA5SP171-201ENST00000391071 115 ntBASIC3.39□□□□□ -1.87
RTN4Q9NQC3 RNU6-602P-201ENST00000411155 105 ntBASIC3.39□□□□□ -1.87
RTN4Q9NQC3 PRSS3P4-201ENST00000453323 162 ntBASIC3.39□□□□□ -1.87
RTN4Q9NQC3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN4Q9NQC3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN4Q9NQC3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RTN4Q9NQC3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.38□□□□□ -1.87
RTN4Q9NQC3 RNU6-1113P-201ENST00000384348 107 ntBASIC3.38□□□□□ -1.87
RTN4Q9NQC3 RNA5SP181-201ENST00000410246 98 ntBASIC3.38□□□□□ -1.87
RTN4Q9NQC3 GTF3AP2-201ENST00000557014 266 ntBASIC3.38□□□□□ -1.87
RTN4Q9NQC3 MIR4444-1-201ENST00000581696 74 ntBASIC3.38□□□□□ -1.87
RTN4Q9NQC3 MIR4444-2-201ENST00000584390 74 ntBASIC3.38□□□□□ -1.87
RTN4Q9NQC3 RNU6-94P-201ENST00000607728 107 ntBASIC3.38□□□□□ -1.87
RTN4Q9NQC3 RNU6-153P-201ENST00000364422 104 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 Y_RNA.323-201ENST00000365157 109 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 SNORA11.1-201ENST00000408133 129 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 RNA5SP274-201ENST00000410484 108 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN4Q9NQC3 MIR2115-201ENST00000516657 100 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 AC019176.1-201ENST00000518519 225 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 MIR8065-201ENST00000620577 100 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN4Q9NQC3 AL162726.3-218ENST00000636401 95 ntBASIC3.37□□□□□ -1.87
RTN4Q9NQC3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
RTN4Q9NQC3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4Q9NQC3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN4Q9NQC3 RNA5SP72-201ENST00000364442 117 ntBASIC3.36□□□□□ -1.87
RTN4Q9NQC3 SNORA7.4-201ENST00000384249 137 ntBASIC3.36□□□□□ -1.87
RTN4Q9NQC3 AL031737.1-201ENST00000450125 223 ntBASIC3.36□□□□□ -1.87
RTN4Q9NQC3 RNA5SP445-201ENST00000515889 115 ntBASIC3.36□□□□□ -1.87
RTN4Q9NQC3 RNU6-1258P-201ENST00000516911 111 ntBASIC3.36□□□□□ -1.87
RTN4Q9NQC3 MIR3192-201ENST00000584920 77 ntBASIC3.36□□□□□ -1.87
RTN4Q9NQC3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4Q9NQC3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4Q9NQC3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4Q9NQC3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN4Q9NQC3 ZNF658B-202ENST00000615961 3375 ntBASIC3.35□□□□□ -1.87
RTN4Q9NQC3 AC073325.2-201ENST00000339545 159 ntBASIC3.35□□□□□ -1.87
RTN4Q9NQC3 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
RTN4Q9NQC3 MT-TI-201ENST00000387365 69 ntBASIC3.35□□□□□ -1.87
RTN4Q9NQC3 MIR3664-201ENST00000579074 99 ntBASIC3.35□□□□□ -1.87
RTN4Q9NQC3 MIR548AE2-201ENST00000583456 67 ntBASIC3.35□□□□□ -1.87
RTN4Q9NQC3 AP000753.3-201ENST00000604083 169 ntBASIC3.35□□□□□ -1.87
RTN4Q9NQC3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.34□□□□□ -1.87
RTN4Q9NQC3 AL035425.3-201ENST00000564206 4996 ntBASIC3.34□□□□□ -1.87
RTN4Q9NQC3 SNORA63.4-201ENST00000362763 126 ntBASIC3.34□□□□□ -1.87
RTN4Q9NQC3 SNORD46.1-201ENST00000364139 104 ntBASIC3.34□□□□□ -1.87
RTN4Q9NQC3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.34□□□□□ -1.87
RTN4Q9NQC3 Y_RNA.549-201ENST00000384657 102 ntBASIC3.34□□□□□ -1.87
RTN4Q9NQC3 AC068339.1-201ENST00000526965 141 ntBASIC3.34□□□□□ -1.87
RTN4Q9NQC3 AC007318.2-201ENST00000620999 243 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms