Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR518F-201ENST00000384973 87 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 RNU2-64P-201ENST00000411315 191 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 AL603825.1-201ENST00000438481 80 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 AC009474.2-201ENST00000451383 136 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 SNORD123-201ENST00000459473 70 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.34□□□□□ -2.19
PCDH9Q9HC56 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.34□□□□□ -2.19
PCDH9Q9HC56 MIR3129-201ENST00000581095 76 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDH9Q9HC56 RNU6-888P-201ENST00000363010 101 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 SNORD24-201ENST00000383884 75 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 MIR570-201ENST00000384917 97 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 MIR548A2-201ENST00000384956 97 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 MIR520C-201ENST00000385005 87 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PCDH9Q9HC56 SNORD28B-201ENST00000390993 75 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 RNU5E-9P-201ENST00000411164 104 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 AC108729.3-201ENST00000513484 108 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 SNORD116-25-201ENST00000516517 92 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 SNORA74.3-201ENST00000517108 154 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 MIR548AR-201ENST00000582191 57 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 GHRLOS.1-201ENST00000610995 70 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 FTX_2.1-201ENST00000618816 94 ntBASIC1.33□□□□□ -2.2
PCDH9Q9HC56 RNU6-1336P-201ENST00000383886 109 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.32□□□□□ -2.2
PCDH9Q9HC56 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.32□□□□□ -2.2
PCDH9Q9HC56 AF228730.3-201ENST00000436691 102 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 AC107027.2-201ENST00000512197 115 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 RNA5SP445-201ENST00000515889 115 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 RNU4-57P-201ENST00000515980 135 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 RNU6-830P-201ENST00000516353 107 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 AC098479.1-201ENST00000609225 154 ntBASIC1.32□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.8-201ENST00000362353 102 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.37-201ENST00000362606 108 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.241-201ENST00000364470 117 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 MT-TR-201ENST00000387439 65 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 SNORD36C-201ENST00000516733 66 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 AL512310.8-201ENST00000550183 120 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 MIR3664-201ENST00000579074 99 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 AC134878.1-201ENST00000619901 243 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 AL121890.5-201ENST00000620848 304 ntBASIC1.31□□□□□ -2.2
PCDH9Q9HC56 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.337-201ENST00000365312 102 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.370-201ENST00000365589 108 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 RNU6-886P-201ENST00000384319 105 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.494-201ENST00000384432 111 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.676-201ENST00000516393 96 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 SNORD111.1-201ENST00000516421 86 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 AP003484.1-201ENST00000530974 250 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 MIR4764-201ENST00000580680 88 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
PCDH9Q9HC56 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
PCDH9Q9HC56 RNU4-84P-201ENST00000364200 139 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 RNU6-978P-201ENST00000364371 103 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 SNORA1.2-201ENST00000365189 134 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 RNU6-768P-201ENST00000384683 107 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
PCDH9Q9HC56 RNU6-239P-201ENST00000390990 99 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 RNU6-1135P-201ENST00000411083 103 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.29□□□□□ -2.2
PCDH9Q9HC56 SNORA18.4-201ENST00000516440 124 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 RN7SKP88-201ENST00000516847 250 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 AL357312.1-201ENST00000603879 298 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 7SK.8-201ENST00000612110 250 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 7SK.11-201ENST00000615477 250 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.29□□□□□ -2.2
PCDH9Q9HC56 7SK.13-201ENST00000622040 250 ntBASIC1.29□□□□□ -2.2
PCDH9Q9HC56 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PCDH9Q9HC56 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
PCDH9Q9HC56 MIR342-201ENST00000362212 99 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 SNORA25.7-201ENST00000364375 127 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 Y_RNA.272-201ENST00000364696 102 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 RNU6-1189P-201ENST00000383958 107 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 RNU6-804P-201ENST00000384286 107 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 SNORD37.2-201ENST00000391075 66 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 SNORD77.3-201ENST00000391113 65 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 PCNPP3-201ENST00000393579 471 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 RNU6-938P-201ENST00000411285 103 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 RPL39P39-201ENST00000455840 151 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 AC107297.1-201ENST00000459991 176 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 RPL30P7-201ENST00000479312 323 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 RNU7-41P-201ENST00000515917 61 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 RNU7-43P-201ENST00000516554 64 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 AL096861.1-201ENST00000610899 123 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 MIR6844-201ENST00000637122 62 ntBASIC1.28□□□□□ -2.2
PCDH9Q9HC56 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
PCDH9Q9HC56 Y_RNA.393-201ENST00000383936 102 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms