Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNU6-184P-201ENST00000516514 107 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 RNU7-28P-201ENST00000516759 62 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 MIR3124-201ENST00000582636 67 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 MIR4305-201ENST00000583252 102 ntBASIC2.36□□□□□ -2.03
RNF38Q9H0F5 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF38Q9H0F5 RNA5SP276-201ENST00000362580 94 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 AC087499.4-201ENST00000448505 178 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 snoU13.15-201ENST00000459407 104 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 RNU7-80P-201ENST00000459562 61 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 RNU2-35P-201ENST00000516446 142 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF38Q9H0F5 AC068339.1-201ENST00000526965 141 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 AC141557.1-201ENST00000540982 400 ntBASIC2.35□□□□□ -2.03
RNF38Q9H0F5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF38Q9H0F5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF38Q9H0F5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF38Q9H0F5 MIRLET7C-201ENST00000362160 84 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 Y_RNA.494-201ENST00000384432 111 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 MIR590-201ENST00000385008 97 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RNF38Q9H0F5 RNU7-181P-201ENST00000517234 74 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 MIR5009-201ENST00000578736 100 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 RNU6-94P-201ENST00000607728 107 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 MIR6715A-201ENST00000615929 79 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 MIR6766-201ENST00000622641 72 ntBASIC2.34□□□□□ -2.03
RNF38Q9H0F5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
RNF38Q9H0F5 SNORA4.2-201ENST00000365313 147 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 Y_RNA.454-201ENST00000384224 113 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 SNORA27-201ENST00000384323 126 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 RNU6-1113P-201ENST00000384348 107 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 MIR548D2-201ENST00000384955 97 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 U8.16-201ENST00000391279 133 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 RN7SKP200-201ENST00000410564 320 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 snoU13.26-201ENST00000459452 105 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF38Q9H0F5 SNORA28-201ENST00000606769 126 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
RNF38Q9H0F5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF38Q9H0F5 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF38Q9H0F5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF38Q9H0F5 RNU6-49P-201ENST00000384256 107 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 SNORA67.3-201ENST00000384366 140 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 SNORA64-201ENST00000384674 134 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 SNORA40.13-201ENST00000516379 120 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 RNU7-6P-201ENST00000516845 62 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 AC090821.2-201ENST00000523552 176 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 SUB1P4-201ENST00000566062 339 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 MIR4778-201ENST00000577635 80 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 MIR3163-201ENST00000581592 73 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 AC104984.5-201ENST00000586878 94 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 AL513534.2-201ENST00000603836 250 ntBASIC2.32□□□□□ -2.04
RNF38Q9H0F5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
RNF38Q9H0F5 MIR302B-201ENST00000362188 73 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 RNU6-294P-201ENST00000364999 102 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 MIR516B2-201ENST00000385190 85 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 AL627390.1-201ENST00000396055 340 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 AL023284.1-201ENST00000403956 276 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF38Q9H0F5 AC015922.2-201ENST00000435593 184 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 MIR4287-201ENST00000579398 78 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.31□□□□□ -2.04
RNF38Q9H0F5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF38Q9H0F5 SNORD73B-201ENST00000364394 72 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 MIR488-201ENST00000365739 83 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 Y_RNA.544-201ENST00000384650 113 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.3□□□□□ -2.04
RNF38Q9H0F5 AC069257.2-201ENST00000441819 155 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 RPL39P25-201ENST00000449384 154 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 RNU7-45P-201ENST00000459460 63 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 RNA5SP57-201ENST00000459463 123 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 RNU6-970P-201ENST00000516312 107 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 RNA5SP168-201ENST00000516642 112 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
RNF38Q9H0F5 SNORA6-201ENST00000384033 151 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 RNU6-424P-201ENST00000384367 105 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 RNA5SP212-201ENST00000391223 107 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 AL034345.1-201ENST00000407768 123 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 MIR1267-201ENST00000408723 78 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.29□□□□□ -2.04
RNF38Q9H0F5 AL035398.1-201ENST00000430869 322 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 RNU6-998P-201ENST00000515894 101 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 RNU7-12P-201ENST00000516030 62 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 SNORA31.4-201ENST00000516049 129 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 MIR3683-201ENST00000580847 82 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 AC027279.3-201ENST00000625055 122 ntBASIC2.29□□□□□ -2.04
RNF38Q9H0F5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
RNF38Q9H0F5 AP000648.3-201ENST00000623539 4507 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 AC080100.1-201ENST00000624239 5356 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNU6-816P-201ENST00000390914 107 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNU6-1268P-201ENST00000391214 107 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNU6-1239P-201ENST00000391310 107 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNU2-7P-201ENST00000410794 178 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNA5SP100-201ENST00000410903 110 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNA5SP59-201ENST00000410922 110 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 AL512326.2-201ENST00000426359 151 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms