Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HIST1H2APS3-201ENST00000403259 134 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 GNG5P5-201ENST00000420444 220 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 AC008065.1-201ENST00000428525 348 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU7-14P-201ENST00000459331 62 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 AC025445.1-201ENST00000502728 300 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 RPL23AP94-201ENST00000512518 302 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU7-99P-201ENST00000516271 62 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA70.19-201ENST00000516717 90 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 AP002004.2-201ENST00000531656 154 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR7851-201ENST00000610611 160 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 U2.7-201ENST00000619197 100 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR6739-201ENST00000622461 75 ntBASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-3Q9BYR4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-3Q9BYR4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA80A-201ENST00000363922 136 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA67.4-201ENST00000384688 142 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR29B1-201ENST00000385015 81 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORD63B-201ENST00000411005 70 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 ARF4P2-201ENST00000430209 526 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 AC112771.1-201ENST00000463581 102 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 S100A11P2-201ENST00000467589 312 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 RPL32P34-201ENST00000486380 400 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 RN7SKP132-201ENST00000516001 208 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 Vault.1-201ENST00000516474 102 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 SCARNA20.6-201ENST00000517251 106 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA40.17-201ENST00000517256 115 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 NAMPTP3-201ENST00000569273 224 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR5004-201ENST00000579078 107 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR5047-201ENST00000579212 100 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 uc_338.1-201ENST00000612113 180 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 uc_338.32-201ENST00000615087 172 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 U6.109-201ENST00000636749 87 ntBASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-3Q9BYR4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA2.1-201ENST00000363089 137 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-1047P-201ENST00000364418 107 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 Y_RNA.246-201ENST00000364495 108 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORD31B-201ENST00000364977 69 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-945P-201ENST00000383947 107 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR329-2-201ENST00000385029 84 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC244098.2-201ENST00000422068 99 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC006989.1-201ENST00000427212 131 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 STAG3L5P-204ENST00000443759 179 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU1-143P-201ENST00000516296 146 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR2114-201ENST00000516645 80 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU7-160P-201ENST00000516660 62 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA31.26-201ENST00000517250 137 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC079600.2-201ENST00000550076 130 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR4325-201ENST00000583049 90 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC090115.4-201ENST00000609970 188 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 U1.23-201ENST00000610293 146 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR6507-201ENST00000613630 70 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU1-68P-201ENST00000615382 146 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AL449363.1-201ENST00000617815 186 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 U1.39-201ENST00000621562 146 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR4317-201ENST00000637586 65 ntBASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms