Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.8□□□□□ -2.28
RSPO3Q9BXY4 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 SNORA20.1-201ENST00000364790 130 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 Y_RNA.308-201ENST00000365043 101 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 RNA5SP496-201ENST00000391240 109 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 RNU6-381P-201ENST00000391259 108 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 SNX2P2-201ENST00000424553 323 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 AC090049.2-201ENST00000550377 109 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 CYP3A52P-201ENST00000563326 91 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 MIR3937-201ENST00000580135 106 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 AL513534.2-201ENST00000603836 250 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 Pinc.1-201ENST00000616452 154 ntBASIC0.79□□□□□ -2.28
RSPO3Q9BXY4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 RNU6-923P-201ENST00000364753 107 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 Y_RNA.336-201ENST00000365307 109 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 Y_RNA.478-201ENST00000384358 107 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 RNU6-493P-201ENST00000391321 108 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 RN7SKP164-201ENST00000516138 266 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 SNORD77.4-201ENST00000516158 81 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 AC007751.1-201ENST00000529260 376 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 MIR5688-201ENST00000580619 83 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 MIR3192-201ENST00000584920 77 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 AL096861.1-201ENST00000610899 123 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 AC006441.5-201ENST00000612680 209 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 AC078938.1-201ENST00000620993 318 ntBASIC0.78□□□□□ -2.28
RSPO3Q9BXY4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 SNORD14E-201ENST00000364009 85 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1138P-201ENST00000365359 106 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-47P-201ENST00000383866 107 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-484P-201ENST00000384016 107 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1065P-201ENST00000384513 106 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 MIR548A2-201ENST00000384956 97 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 SNORD28B-201ENST00000390993 75 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 AL606845.1-201ENST00000404881 255 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.622-201ENST00000411091 108 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU7-25P-201ENST00000516544 62 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 SNORA18.7-201ENST00000516910 131 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-388P-201ENST00000517012 105 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-389P-201ENST00000517048 105 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1271P-201ENST00000517049 105 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 AC130289.1-201ENST00000577321 73 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 MIR548AR-201ENST00000582191 57 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.77□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.188-201ENST00000363952 111 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.262-201ENST00000364641 102 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 RNU6-442P-201ENST00000383968 104 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 SNORD61-201ENST00000384252 73 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 MIR452-201ENST00000385020 85 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 MIR216A-201ENST00000385063 110 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 MIR616-201ENST00000385293 97 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 MT-TG-201ENST00000387429 68 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 SNORD123-201ENST00000459473 70 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 RNU7-41P-201ENST00000515917 61 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 RNU4-57P-201ENST00000515980 135 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.714-201ENST00000517065 90 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 AC087685.1-201ENST00000587507 141 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 AC009779.6-201ENST00000603972 165 ntBASIC0.76□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 SNORD45.3-201ENST00000363836 72 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.274-201ENST00000364714 101 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.401-201ENST00000383965 117 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 MIR570-201ENST00000384917 97 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 MIR136-201ENST00000385207 82 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 RNU6-918P-201ENST00000391219 106 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 AL451046.2-201ENST00000403074 277 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 HMGN2P32-201ENST00000444648 269 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 AC048334.1-201ENST00000477975 159 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 RNU4-71P-201ENST00000516258 113 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 RNU6-947P-201ENST00000516264 106 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 RNU6-830P-201ENST00000516353 107 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1007P-201ENST00000516586 107 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 SNORA74.3-201ENST00000517108 154 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 RNU7-181P-201ENST00000517234 74 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 AC022559.1-201ENST00000520905 205 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 RNU2-4P-201ENST00000606190 192 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
RSPO3Q9BXY4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 RNU4-17P-201ENST00000365598 141 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 MIR518F-201ENST00000384973 87 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 U8.17-201ENST00000391292 132 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 RNU6-938P-201ENST00000411285 103 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms