Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR3670-4-201ENST00000612260 65 ntBASIC2.17□□□□□ -2.06
SSBP3Q9BWW4 U7.3-201ENST00000616123 62 ntBASIC2.17□□□□□ -2.06
SSBP3Q9BWW4 AC095038.3-201ENST00000634439 195 ntBASIC2.17□□□□□ -2.06
SSBP3Q9BWW4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SSBP3Q9BWW4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC092881.1-201ENST00000638218 2733 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 RNU6-950P-201ENST00000384651 107 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 MRPL35P3-201ENST00000421557 364 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC092427.1-202ENST00000430569 476 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC069257.2-201ENST00000441819 155 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 RNU2-13P-201ENST00000515909 113 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 RNU7-181P-201ENST00000517234 74 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC069114.2-201ENST00000604699 304 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 MIR6817-201ENST00000615588 66 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 AC012531.4-201ENST00000616509 177 ntBASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SSBP3Q9BWW4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.15□□□□□ -2.06
SSBP3Q9BWW4 AP006437.1-201ENST00000641440 3685 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 MIRLET7C-201ENST00000362160 84 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 SNORD115-3-201ENST00000363100 82 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 RNA5SP68-201ENST00000363885 119 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 SNORD45B-201ENST00000364617 72 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 SNORA70.7-201ENST00000384159 133 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 RNU6-242P-201ENST00000384359 107 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 MIR605-201ENST00000385078 83 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 AL034345.1-201ENST00000407768 123 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 SNORA7.5-201ENST00000410672 110 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 POLR2J4-204ENST00000418424 324 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 RPL23AP63-201ENST00000498752 471 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 RPL23AP94-201ENST00000512518 302 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 RNU6-162P-201ENST00000516228 103 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 AC010297.1-201ENST00000623948 149 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 MIR3202-2-201ENST00000635980 79 ntBASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SSBP3Q9BWW4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 MIR449A-201ENST00000362113 91 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNU6-833P-201ENST00000363486 107 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNU6-1124P-201ENST00000384169 107 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNU6-1319P-201ENST00000390855 104 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNU6-747P-201ENST00000390928 104 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNU6-241P-201ENST00000391148 104 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNA5SP261-201ENST00000410536 106 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNU6-177P-201ENST00000411257 104 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 AC022137.1-201ENST00000483735 151 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 SNORA31.4-201ENST00000516049 129 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNA5SP148-201ENST00000516527 94 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.14□□□□□ -2.07
SSBP3Q9BWW4 RNU6-60P-201ENST00000364792 103 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 AL451046.2-201ENST00000403074 277 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 RPL39P39-201ENST00000455840 151 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 RNU7-12P-201ENST00000516030 62 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 RNU6-1018P-201ENST00000516577 106 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 RNA5SP33-201ENST00000516687 98 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 RNU7-53P-201ENST00000516705 60 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 AC096720.1-201ENST00000604441 183 ntBASIC2.13□□□□□ -2.07
SSBP3Q9BWW4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 RNU1-58P-201ENST00000362413 163 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 SNORD115-2-201ENST00000362842 82 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 SNORD115-20-201ENST00000365099 82 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 RNU1-138P-201ENST00000384093 164 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 SNORD116-22-201ENST00000384430 92 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 MIR27B-201ENST00000385129 97 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 AL445687.1-201ENST00000439946 251 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 AL513328.1-201ENST00000446460 224 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 RNU7-67P-201ENST00000459003 62 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 RNU7-45P-201ENST00000459460 63 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 Y_RNA.659-201ENST00000515994 113 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 SNORA31.10-201ENST00000516482 106 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 Y_RNA.705-201ENST00000516862 110 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 RNU6-958P-201ENST00000516995 106 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 MIR4435-1-201ENST00000582552 80 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 MIR5194-201ENST00000582634 120 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 AL049779.4-201ENST00000604500 156 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 U4.3-201ENST00000621047 82 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 FO624990.1-201ENST00000636373 85 ntBASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SSBP3Q9BWW4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 RNU4-82P-201ENST00000362443 140 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms