Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU6-414P-201ENST00000363705 104 ntBASIC1.84□□□□□ -2.11
SMOQ99835 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
SMOQ99835 AL627390.1-201ENST00000396055 340 ntBASIC1.84□□□□□ -2.11
SMOQ99835 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
SMOQ99835 AC004965.1-201ENST00000413033 213 ntBASIC1.84□□□□□ -2.11
SMOQ99835 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.84□□□□□ -2.11
SMOQ99835 JTBP1-201ENST00000441314 247 ntBASIC1.84□□□□□ -2.11
SMOQ99835 AC245517.4-201ENST00000448601 281 ntBASIC1.84□□□□□ -2.11
SMOQ99835 Y_RNA.686-201ENST00000516548 134 ntBASIC1.84□□□□□ -2.11
SMOQ99835 SNORD36C-201ENST00000516733 66 ntBASIC1.84□□□□□ -2.11
SMOQ99835 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.84□□□□□ -2.11
SMOQ99835 AC106754.2-201ENST00000623006 233 ntBASIC1.84□□□□□ -2.11
SMOQ99835 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SMOQ99835 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SMOQ99835 RNU6-661P-201ENST00000362409 107 ntBASIC1.83□□□□□ -2.12
SMOQ99835 RNU6-915P-201ENST00000364943 103 ntBASIC1.83□□□□□ -2.12
SMOQ99835 SNORA19-201ENST00000384737 128 ntBASIC1.83□□□□□ -2.12
SMOQ99835 RNU6-830P-201ENST00000516353 107 ntBASIC1.83□□□□□ -2.12
SMOQ99835 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
SMOQ99835 U2.22-201ENST00000636441 106 ntBASIC1.83□□□□□ -2.12
SMOQ99835 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SMOQ99835 MTND5P32-201ENST00000560711 1802 ntBASIC1.82□□□□□ -2.12
SMOQ99835 RNU6-508P-201ENST00000363231 103 ntBASIC1.82□□□□□ -2.12
SMOQ99835 RNU6-81P-201ENST00000365608 104 ntBASIC1.82□□□□□ -2.12
SMOQ99835 Y_RNA.410-201ENST00000383992 113 ntBASIC1.82□□□□□ -2.12
SMOQ99835 Y_RNA.466-201ENST00000384294 113 ntBASIC1.82□□□□□ -2.12
SMOQ99835 SNORA40-201ENST00000388090 126 ntBASIC1.82□□□□□ -2.12
SMOQ99835 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
SMOQ99835 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
SMOQ99835 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
SMOQ99835 AP001328.1-201ENST00000528550 176 ntBASIC1.82□□□□□ -2.12
SMOQ99835 MIR3683-201ENST00000580847 82 ntBASIC1.82□□□□□ -2.12
SMOQ99835 MIR5197-201ENST00000583721 112 ntBASIC1.82□□□□□ -2.12
SMOQ99835 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
SMOQ99835 AP001340.1-201ENST00000624405 217 ntBASIC1.82□□□□□ -2.12
SMOQ99835 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SMOQ99835 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMOQ99835 RNU6-1189P-201ENST00000383958 107 ntBASIC1.81□□□□□ -2.12
SMOQ99835 MIR136-201ENST00000385207 82 ntBASIC1.81□□□□□ -2.12
SMOQ99835 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SMOQ99835 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.81□□□□□ -2.12
SMOQ99835 SNORA25.15-201ENST00000516487 89 ntBASIC1.81□□□□□ -2.12
SMOQ99835 SCARNA15-202ENST00000516881 127 ntBASIC1.81□□□□□ -2.12
SMOQ99835 RNU7-181P-201ENST00000517234 74 ntBASIC1.81□□□□□ -2.12
SMOQ99835 AP003484.1-201ENST00000530974 250 ntBASIC1.81□□□□□ -2.12
SMOQ99835 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.81□□□□□ -2.12
SMOQ99835 SNORA77B-201ENST00000578179 125 ntBASIC1.81□□□□□ -2.12
SMOQ99835 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.81□□□□□ -2.12
SMOQ99835 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.8□□□□□ -2.12
SMOQ99835 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.8□□□□□ -2.12
SMOQ99835 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
SMOQ99835 Y_RNA.120-201ENST00000363304 110 ntBASIC1.8□□□□□ -2.12
SMOQ99835 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
SMOQ99835 Y_RNA.355-201ENST00000365462 98 ntBASIC1.8□□□□□ -2.12
SMOQ99835 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
SMOQ99835 U8.17-201ENST00000391292 132 ntBASIC1.8□□□□□ -2.12
SMOQ99835 MIR1267-201ENST00000408723 78 ntBASIC1.8□□□□□ -2.12
SMOQ99835 AC087499.4-201ENST00000448505 178 ntBASIC1.8□□□□□ -2.12
SMOQ99835 RNA5SP236-201ENST00000516169 116 ntBASIC1.8□□□□□ -2.12
SMOQ99835 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
SMOQ99835 RNU6-1149P-201ENST00000516810 97 ntBASIC1.8□□□□□ -2.12
SMOQ99835 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
SMOQ99835 MIR4498-201ENST00000577599 66 ntBASIC1.8□□□□□ -2.12
SMOQ99835 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
SMOQ99835 FAM106DP-201ENST00000586416 501 ntBASIC1.8□□□□□ -2.12
SMOQ99835 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
SMOQ99835 Y_RNA.294-201ENST00000364916 102 ntBASIC1.79□□□□□ -2.12
SMOQ99835 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
SMOQ99835 SNORD113-1-201ENST00000365321 69 ntBASIC1.79□□□□□ -2.12
SMOQ99835 Y_RNA.494-201ENST00000384432 111 ntBASIC1.79□□□□□ -2.12
SMOQ99835 MIR513A1-201ENST00000385138 129 ntBASIC1.79□□□□□ -2.12
SMOQ99835 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
SMOQ99835 RNU6-971P-201ENST00000516920 106 ntBASIC1.79□□□□□ -2.12
SMOQ99835 MIR8074-201ENST00000615081 81 ntBASIC1.79□□□□□ -2.12
SMOQ99835 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMOQ99835 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
SMOQ99835 MIR337-201ENST00000362281 93 ntBASIC1.78□□□□□ -2.12
SMOQ99835 RNA5SP259-201ENST00000365541 109 ntBASIC1.78□□□□□ -2.12
SMOQ99835 Y_RNA.440-201ENST00000384120 114 ntBASIC1.78□□□□□ -2.12
SMOQ99835 SNORD28B-201ENST00000390993 75 ntBASIC1.78□□□□□ -2.12
SMOQ99835 SNORD13-201ENST00000459299 104 ntBASIC1.78□□□□□ -2.12
SMOQ99835 SNORA18.7-201ENST00000516910 131 ntBASIC1.78□□□□□ -2.12
SMOQ99835 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.78□□□□□ -2.12
SMOQ99835 MIR3618-201ENST00000580330 88 ntBASIC1.78□□□□□ -2.12
SMOQ99835 RNU6-309P-201ENST00000364573 106 ntBASIC1.77□□□□□ -2.13
SMOQ99835 SNORA2.2-201ENST00000365473 135 ntBASIC1.77□□□□□ -2.13
SMOQ99835 RNU6-959P-201ENST00000384671 107 ntBASIC1.77□□□□□ -2.13
SMOQ99835 AL606753.1-201ENST00000427435 87 ntBASIC1.77□□□□□ -2.13
SMOQ99835 RNU6-1211P-201ENST00000459179 105 ntBASIC1.77□□□□□ -2.13
SMOQ99835 SNORD123-201ENST00000459473 70 ntBASIC1.77□□□□□ -2.13
SMOQ99835 Y_RNA.690-201ENST00000516603 95 ntBASIC1.77□□□□□ -2.13
SMOQ99835 AC015688.6-201ENST00000577737 104 ntBASIC1.77□□□□□ -2.13
SMOQ99835 U7.2-201ENST00000607576 63 ntBASIC1.77□□□□□ -2.13
SMOQ99835 Y_RNA.218-201ENST00000364218 104 ntBASIC1.76□□□□□ -2.13
SMOQ99835 Y_RNA.241-201ENST00000364470 117 ntBASIC1.76□□□□□ -2.13
SMOQ99835 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SMOQ99835 AL603914.1-201ENST00000401964 204 ntBASIC1.76□□□□□ -2.13
SMOQ99835 AC005908.1-201ENST00000468701 347 ntBASIC1.76□□□□□ -2.13
SMOQ99835 RPS26P48-201ENST00000491713 339 ntBASIC1.76□□□□□ -2.13
SMOQ99835 AC090821.2-201ENST00000523552 176 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms