Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RNU7-141P-201ENST00000459304 62 ntBASIC-0.56□□□□□ -2.5
CCL13Q99616 AP001282.2-201ENST00000616149 309 ntBASIC-0.56□□□□□ -2.5
CCL13Q99616 PISRT1.1-201ENST00000616930 107 ntBASIC-0.56□□□□□ -2.5
CCL13Q99616 AC022140.2-201ENST00000623500 188 ntBASIC-0.56□□□□□ -2.5
CCL13Q99616 MIR3974-201ENST00000637126 96 ntBASIC-0.56□□□□□ -2.5
CCL13Q99616 RNU6-535P-201ENST00000384722 107 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 U8.15-201ENST00000390947 134 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 MIR548I3-201ENST00000408378 149 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 MIR548K-201ENST00000408406 116 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 MIR548F5-201ENST00000408421 86 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 HMGN2P22-201ENST00000427588 175 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.57□□□□□ -2.5
CCL13Q99616 AP001180.6-201ENST00000584918 159 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 AC005357.1-201ENST00000588399 301 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 AC124312.5-201ENST00000604451 268 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 MIR3666-201ENST00000607845 111 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 AL442067.1-201ENST00000613261 223 ntBASIC-0.57□□□□□ -2.5
CCL13Q99616 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
CCL13Q99616 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 SNORD77.3-201ENST00000391113 65 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 RNA5SP237-201ENST00000410414 113 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 RNU7-149P-201ENST00000516739 59 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 MIR5589-201ENST00000579442 60 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 MIR4491-201ENST00000581087 68 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCL13Q99616 AC092447.9-201ENST00000603395 144 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 AL133255.1-201ENST00000606374 441 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 AC015540.1-201ENST00000615828 501 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 AL662814.1-201ENST00000617364 121 ntBASIC-0.58□□□□□ -2.5
CCL13Q99616 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 SNORA72.6-201ENST00000384520 129 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 MIR1912-201ENST00000410389 80 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 RNU2-11P-201ENST00000459191 187 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 MTND5P34-201ENST00000568888 325 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 U7.6-201ENST00000610841 64 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 AC122108.2-201ENST00000611946 526 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 AC010205.1-201ENST00000616668 449 ntBASIC-0.59□□□□□ -2.5
CCL13Q99616 SNORD81.1-201ENST00000363064 77 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RNA5SP275-201ENST00000363936 118 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RNU6-708P-201ENST00000384217 107 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RNA5SP300-201ENST00000391197 107 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RNU7-96P-201ENST00000459535 64 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RPS29P25-201ENST00000481709 171 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RNU6-475P-201ENST00000516073 104 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 RNU6-314P-201ENST00000516574 104 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 AC144568.1-201ENST00000520139 137 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 MIR5706-201ENST00000579841 80 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 MIR4423-201ENST00000580922 80 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 MIR4636-201ENST00000582271 80 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 AC011921.3-201ENST00000605540 361 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 AC245008.1-201ENST00000608123 476 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 AC063944.3-201ENST00000609969 533 ntBASIC-0.6□□□□□ -2.51
CCL13Q99616 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 SNORA72.4-201ENST00000384174 132 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 RNU2-14P-201ENST00000411053 191 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 AC107399.1-201ENST00000451226 265 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 RNU7-169P-201ENST00000459456 61 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.61□□□□□ -2.51
CCL13Q99616 SNORD36C-201ENST00000516733 66 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 RNU7-4P-201ENST00000516961 62 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 MIR6514-201ENST00000622549 70 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 TPTEP1-208ENST00000636884 213 ntBASIC-0.61□□□□□ -2.51
CCL13Q99616 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 SNORD14C-201ENST00000365382 88 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 RNU6-998P-201ENST00000515894 101 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.62□□□□□ -2.51
CCL13Q99616 MIR3145-201ENST00000580727 82 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 MIR4493-201ENST00000584016 73 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 MIR3925-201ENST00000584674 77 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 SNORA70.25-201ENST00000612741 95 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.62□□□□□ -2.51
CCL13Q99616 MIR6717-201ENST00000622747 73 ntBASIC-0.62□□□□□ -2.51
CCL13Q99616 MIR101-1-201ENST00000362265 75 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 SNORA75.1-201ENST00000391130 148 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 AC096531.1-201ENST00000419107 107 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 RNU6-120P-201ENST00000516077 103 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 RNU6-693P-201ENST00000516134 107 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 RNU6-506P-201ENST00000516553 94 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 AP003072.1-201ENST00000531740 145 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 CR383656.4-201ENST00000546909 122 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 U6.92-201ENST00000636464 89 ntBASIC-0.63□□□□□ -2.51
CCL13Q99616 AL596211.1-201ENST00000569873 2277 ntBASIC-0.64□□□□□ -2.51
CCL13Q99616 RNY4P14-201ENST00000363656 96 ntBASIC-0.64□□□□□ -2.51
CCL13Q99616 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.64□□□□□ -2.51
CCL13Q99616 RNU6-726P-201ENST00000364680 107 ntBASIC-0.64□□□□□ -2.51
CCL13Q99616 SNORD49B-201ENST00000365172 72 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms