Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 MIR548A2-201ENST00000384956 97 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 MIR1912-201ENST00000410389 80 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 MTATP6P17-201ENST00000431030 672 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 RNU6-998P-201ENST00000515894 101 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 RNU7-188P-201ENST00000517063 64 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 AC009094.1-201ENST00000564443 426 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 MIR3942-201ENST00000585264 109 ntBASIC-1.03□□□□□ -2.57
AP1S3Q96PC3 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.04□□□□□ -2.58
AP1S3Q96PC3 SNORA36B-201ENST00000410438 131 ntBASIC-1.04□□□□□ -2.58
AP1S3Q96PC3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.04□□□□□ -2.58
AP1S3Q96PC3 FCF1P4-201ENST00000448326 183 ntBASIC-1.04□□□□□ -2.58
AP1S3Q96PC3 SNORD11.1-201ENST00000459482 85 ntBASIC-1.04□□□□□ -2.58
AP1S3Q96PC3 RNU6-653P-201ENST00000363074 106 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 RNU6-455P-201ENST00000384681 107 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 RNU2-14P-201ENST00000411053 191 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 RNU4-63P-201ENST00000411313 118 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 AC098826.2-201ENST00000452011 651 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 SNORD5.1-201ENST00000458800 75 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 RNU7-149P-201ENST00000516739 59 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 AC091931.1-201ENST00000623488 728 ntBASIC-1.05□□□□□ -2.58
AP1S3Q96PC3 RNY1P13-201ENST00000365030 105 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 SNORD116-9-201ENST00000384000 95 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 SNORD116-3-201ENST00000384287 95 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 SNORD116-8-201ENST00000384365 95 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 SNORD116-7-201ENST00000384404 95 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 SNORD116-5-201ENST00000384462 95 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 MIR604-201ENST00000384880 94 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 MIR224-201ENST00000384889 81 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 RNU7-96P-201ENST00000459535 64 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 RNU6-175P-201ENST00000516896 107 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 RNU2-31P-201ENST00000516954 155 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 MIR3681-201ENST00000580089 72 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 AC022441.3-201ENST00000605737 136 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 AC093726.3-201ENST00000637588 150 ntBASIC-1.06□□□□□ -2.58
AP1S3Q96PC3 MIR342-201ENST00000362212 99 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 RNU6-47P-201ENST00000383866 107 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 MIR9-2-201ENST00000384838 87 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 RNU6-710P-201ENST00000410424 105 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 AL080274.1-201ENST00000605565 220 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 AC011373.1-201ENST00000607270 237 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 AC068137.3-201ENST00000639191 341 ntBASIC-1.07□□□□□ -2.58
AP1S3Q96PC3 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 MIR625-201ENST00000385047 85 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 AC023449.1-201ENST00000454464 154 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 RNU7-141P-201ENST00000459304 62 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 DEFB131E-201ENST00000532329 154 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 MIR4280-201ENST00000582178 76 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 AC005357.1-201ENST00000588399 301 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 DEFB117-201ENST00000602356 141 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.08□□□□□ -2.58
AP1S3Q96PC3 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 AL445567.1-201ENST00000439121 144 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 AL445193.1-201ENST00000441183 141 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 RNU6-693P-201ENST00000516134 107 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 MIR4423-201ENST00000580922 80 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 MIR1244-1-201ENST00000612829 85 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 MIR6128-201ENST00000615528 109 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 AC011476.5-201ENST00000615594 130 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 MIR1244-3-201ENST00000635744 85 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 MIR1244-2-201ENST00000636449 85 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 MIR1244-4-202ENST00000636813 85 ntBASIC-1.09□□□□□ -2.58
AP1S3Q96PC3 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 SNORD81.1-201ENST00000363064 77 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 SNORA75-201ENST00000384158 137 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 SNORD61-201ENST00000384252 73 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 SNORD56B-201ENST00000384713 71 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 MIR181B2-201ENST00000385004 89 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 AF228730.3-201ENST00000436691 102 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 RNU6-273P-201ENST00000516937 96 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 MIR4473-201ENST00000583731 91 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 AC022960.3-201ENST00000619794 441 ntBASIC-1.1□□□□□ -2.59
AP1S3Q96PC3 RNU4-73P-201ENST00000363164 141 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 RNA5SP133-201ENST00000363368 119 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 MIR626-201ENST00000385032 94 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 MIR196A1-201ENST00000388006 70 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 MIR4636-201ENST00000582271 80 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 AC073648.5-201ENST00000603502 305 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 AC087752.4-201ENST00000605911 462 ntBASIC-1.11□□□□□ -2.59
AP1S3Q96PC3 RNU4-58P-201ENST00000363192 141 ntBASIC-1.12□□□□□ -2.59
AP1S3Q96PC3 RNU6-509P-201ENST00000363519 107 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms