Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC002984.1-201ENST00000591692 448 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 HSPE1P19-201ENST00000603327 295 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHFRQ96EP1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.25□□□□□ -2.05
CHFRQ96EP1 AC092881.1-201ENST00000638218 2733 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 MIR126-201ENST00000362291 85 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 Y_RNA.244-201ENST00000364484 109 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RNU6-1189P-201ENST00000383958 107 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 Y_RNA.410-201ENST00000383992 113 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RNY1P6-201ENST00000384193 109 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 MIR522-201ENST00000385071 87 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 MIR561-201ENST00000385216 97 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 U8.17-201ENST00000391292 132 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 MIR548O-201ENST00000408583 114 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RNU6-938P-201ENST00000411285 103 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 HMGN2P34-201ENST00000437647 269 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RPL39P39-201ENST00000455840 151 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RNU7-61P-201ENST00000515897 61 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RNU7-25P-201ENST00000516544 62 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RNU6-521P-201ENST00000516663 105 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 SNORD36C-201ENST00000516733 66 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 RNA5SP490-201ENST00000517141 136 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 SNORA31.25-201ENST00000517242 134 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHFRQ96EP1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.25□□□□□ -2.05
CHFRQ96EP1 AC022254.1-201ENST00000567857 235 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 MIR3202-2-201ENST00000635980 79 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 U6.108-201ENST00000637764 58 ntBASIC2.25□□□□□ -2.05
CHFRQ96EP1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHFRQ96EP1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHFRQ96EP1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHFRQ96EP1 Y_RNA.37-201ENST00000362606 108 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 RNU6-497P-201ENST00000365316 104 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 FTH1P12-201ENST00000432137 551 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 SNRPGP14-201ENST00000435400 219 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 RNA5SP233-201ENST00000459153 113 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 RNU2-13P-201ENST00000515909 113 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 RNU7-99P-201ENST00000516271 62 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 MIR3163-201ENST00000581592 73 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 MIR4305-201ENST00000583252 102 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 MIR548Z-201ENST00000584743 97 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 AC022217.4-201ENST00000604389 163 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 AC012531.4-201ENST00000616509 177 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.24□□□□□ -2.05
CHFRQ96EP1 MIR219B-201ENST00000637023 88 ntBASIC2.24□□□□□ -2.05
CHFRQ96EP1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNU4-36P-201ENST00000364294 144 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNY1P1-201ENST00000364372 112 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 SNORA16B-201ENST00000364674 135 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNU6-1276P-201ENST00000365372 104 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 Y_RNA.440-201ENST00000384120 114 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNU6-644P-201ENST00000391155 98 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNA5SP467-201ENST00000391274 118 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 MIR1253-201ENST00000408273 105 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 MIR1912-201ENST00000410389 80 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 Y_RNA.601-201ENST00000410500 113 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 AC113410.1-201ENST00000505029 247 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 AC093259.1-201ENST00000509755 300 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNU6-162P-201ENST00000516228 103 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNU6-795P-201ENST00000516323 103 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 RNU6-341P-201ENST00000516973 96 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 AC087685.1-201ENST00000587507 141 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 AC006441.5-201ENST00000612680 209 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 AC087741.2-201ENST00000619415 172 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 MIR6079-201ENST00000635807 62 ntBASIC2.23□□□□□ -2.05
CHFRQ96EP1 AC018630.2-201ENST00000534866 2403 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 RNU6-1125P-201ENST00000363601 107 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 RNU6-743P-201ENST00000364151 106 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 Y_RNA.267-201ENST00000364679 109 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 U8.13-201ENST00000390842 128 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 RNU6-482P-201ENST00000391068 107 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 AC123900.1-201ENST00000420390 96 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CHFRQ96EP1 RNU1-131P-201ENST00000458943 161 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 SNORA31.4-201ENST00000516049 129 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 RNU7-6P-201ENST00000516845 62 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 AC026271.5-201ENST00000577873 130 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 Y_RNA.773-201ENST00000607168 90 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 U7.3-201ENST00000616123 62 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
CHFRQ96EP1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
CHFRQ96EP1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHFRQ96EP1 SNORA1B-201ENST00000362535 133 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 RNU6-170P-201ENST00000362832 104 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 SNORD115-28-201ENST00000363931 81 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 RNU6-268P-201ENST00000364174 107 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 RNU1-133P-201ENST00000364867 167 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 SNORA4.2-201ENST00000365313 147 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 RNU6-675P-201ENST00000384236 104 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 Y_RNA.531-201ENST00000384589 121 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 MIR577-201ENST00000385196 96 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 AL353813.1-201ENST00000440700 253 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 SNORA4.4-201ENST00000515921 135 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 MIR3618-201ENST00000580330 88 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 256.8 ms