Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC006441.5-201ENST00000612680 209 ntBASIC1.57□□□□□ -2.16
RTP4Q96DX8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.57□□□□□ -2.16
RTP4Q96DX8 U8.1-201ENST00000362843 134 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 SNORA25.7-201ENST00000364375 127 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 SNORD24-201ENST00000383884 75 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 RNU6-442P-201ENST00000383968 104 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 Y_RNA.547-201ENST00000384654 119 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 MIR676-201ENST00000390702 67 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 SNORA26-201ENST00000391286 122 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 AL034345.1-201ENST00000407768 123 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 AL606753.1-201ENST00000427435 87 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 SNRPGP13-201ENST00000442212 177 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 CYCTP-201ENST00000504253 315 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 AL365205.2-201ENST00000594586 68 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 AL512598.1-201ENST00000610158 273 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 AC091895.1-201ENST00000624494 256 ntBASIC1.56□□□□□ -2.16
RTP4Q96DX8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RTP4Q96DX8 MIR802-201ENST00000390235 94 ntBASIC1.55□□□□□ -2.16
RTP4Q96DX8 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
RTP4Q96DX8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.55□□□□□ -2.16
RTP4Q96DX8 RNU7-12P-201ENST00000516030 62 ntBASIC1.55□□□□□ -2.16
RTP4Q96DX8 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
RTP4Q96DX8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.55□□□□□ -2.16
RTP4Q96DX8 Y_RNA.52-201ENST00000362760 96 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 RNU6-915P-201ENST00000364943 103 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 MIR526A1-201ENST00000384897 85 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RTP4Q96DX8 RNU6-938P-201ENST00000411285 103 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 RNU6-971P-201ENST00000516920 106 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 AC090142.3-201ENST00000519012 385 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 AC103810.8-201ENST00000607347 118 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 AC015726.2-201ENST00000620112 122 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 AC027279.3-201ENST00000625055 122 ntBASIC1.54□□□□□ -2.16
RTP4Q96DX8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RTP4Q96DX8 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 RNU6-833P-201ENST00000363486 107 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 Y_RNA.218-201ENST00000364218 104 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 Y_RNA.226-201ENST00000364337 114 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 Y_RNA.242-201ENST00000364473 110 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 RNU6-950P-201ENST00000384651 107 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 MIR516B2-201ENST00000385190 85 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 Y_RNA.584-201ENST00000391090 114 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 AC015922.2-201ENST00000435593 184 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 PGBD4P5-201ENST00000445958 426 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.53□□□□□ -2.16
RTP4Q96DX8 TRMT112P2-201ENST00000512910 132 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 SNORA18.4-201ENST00000516440 124 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 SNORD36C-201ENST00000516733 66 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 RNA5SP481-201ENST00000516814 122 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.53□□□□□ -2.16
RTP4Q96DX8 AL442644.1-201ENST00000454390 3105 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 MIR337-201ENST00000362281 93 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 RNY1P10-201ENST00000363268 113 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 RNU6-959P-201ENST00000384671 107 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 MIR624-201ENST00000385217 97 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 MIR660-201ENST00000385235 97 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 SNORA40-201ENST00000388090 126 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 RNU6-360P-201ENST00000390944 104 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 MIR891A-201ENST00000401237 79 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 RNA5SP127-201ENST00000411051 133 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.52□□□□□ -2.17
RTP4Q96DX8 RNU4-57P-201ENST00000515980 135 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 RNU6-1234P-201ENST00000516877 103 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 AC131055.1-201ENST00000584626 316 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 SNORD3E-202ENST00000627253 216 ntBASIC1.52□□□□□ -2.17
RTP4Q96DX8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
RTP4Q96DX8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
RTP4Q96DX8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 RNU6-309P-201ENST00000364573 106 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 Y_RNA.525-201ENST00000384570 113 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 MIR194-1-201ENST00000384892 85 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 MIR548I2-201ENST00000408348 149 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 HMGN2P32-201ENST00000444648 269 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 RNU6-1211P-201ENST00000459179 105 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 SCARNA15-202ENST00000516881 127 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 AL513423.1-201ENST00000621695 132 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 AC106754.2-201ENST00000623006 233 ntBASIC1.51□□□□□ -2.17
RTP4Q96DX8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RTP4Q96DX8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RTP4Q96DX8 MIR424-201ENST00000362227 98 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 SNORD115-28-201ENST00000363931 81 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.5□□□□□ -2.17
RTP4Q96DX8 RNA5SP236-201ENST00000516169 116 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 RNU7-181P-201ENST00000517234 74 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 AP001328.1-201ENST00000528550 176 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 AL365222.1-201ENST00000614661 98 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 AP001340.1-201ENST00000624405 217 ntBASIC1.5□□□□□ -2.17
RTP4Q96DX8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms