Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIR410-201ENST00000362222 80 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-931P-201ENST00000363850 107 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-82P-201ENST00000363970 107 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 SNORD115-30-201ENST00000364117 82 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-652P-201ENST00000365488 107 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 U8.15-201ENST00000390947 134 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-855P-201ENST00000410395 104 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 MTND3P8-201ENST00000412909 339 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AL593851.1-201ENST00000426171 157 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.39□□□□□ -2.47
TTC28Q96AY4 MTCO2P30-201ENST00000503662 364 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-107P-201ENST00000516643 102 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AC131281.1-201ENST00000522984 164 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 MIR4703-201ENST00000577728 79 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 MIR4676-201ENST00000583078 72 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AP000240.1-201ENST00000609910 452 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 SNORA70.25-201ENST00000612741 95 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-181P-201ENST00000363225 107 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-131P-201ENST00000391144 107 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.39□□□□□ -2.47
TTC28Q96AY4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.39□□□□□ -2.47
TTC28Q96AY4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-916P-201ENST00000516088 109 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 RNU6-445P-201ENST00000516949 107 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 MIR5583-1-201ENST00000580941 59 ntBASIC-0.39□□□□□ -2.47
TTC28Q96AY4 SNORD114-17-201ENST00000364699 75 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 RNU6-281P-201ENST00000384212 103 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 SNORA72-201ENST00000384339 132 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AC091179.3-201ENST00000474761 144 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AP003461.1-201ENST00000528866 78 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.4□□□□□ -2.47
TTC28Q96AY4 MIR3152-201ENST00000579801 74 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 MIR4424-201ENST00000585257 86 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 MTND1P7-201ENST00000632801 297 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 U6.115-201ENST00000636045 103 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 RNU6-280P-201ENST00000364145 104 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 RNY4P34-201ENST00000364779 95 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AL138752.1-201ENST00000452964 351 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 RNU7-161P-201ENST00000517289 62 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.4□□□□□ -2.47
TTC28Q96AY4 MIR3941-201ENST00000582572 103 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AC121247.2-201ENST00000604776 136 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 TUSC7.1-201ENST00000610969 165 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 AL158063.1-201ENST00000615349 536 ntBASIC-0.4□□□□□ -2.47
TTC28Q96AY4 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 RNU4-10P-201ENST00000364383 140 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 SNORD50B-201ENST00000364995 70 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 SNORD56B-201ENST00000384713 71 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 MIR527-201ENST00000385244 85 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.41□□□□□ -2.47
TTC28Q96AY4 RNU6-519P-201ENST00000410590 108 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.41□□□□□ -2.47
TTC28Q96AY4 RNU7-175P-201ENST00000515915 61 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 SNORA19.2-201ENST00000516013 114 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 SNORA18.6-201ENST00000516792 115 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 AL158211.2-201ENST00000607282 395 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 FTX_4.1-201ENST00000616291 147 ntBASIC-0.41□□□□□ -2.47
TTC28Q96AY4 SNORD115-32-201ENST00000364079 82 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 SNORA63C-201ENST00000364578 129 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 RNU6-702P-201ENST00000364982 107 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 RNU2-9P-201ENST00000410194 145 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.41□□□□□ -2.48
TTC28Q96AY4 USMG5P1-201ENST00000425964 177 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 MTATP6P17-201ENST00000431030 672 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 USP9YP12-201ENST00000450481 570 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 RNU7-73P-201ENST00000458743 63 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 RNU7-67P-201ENST00000459003 62 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 CPDP1-201ENST00000579660 283 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 MIR8055-201ENST00000610739 97 ntBASIC-0.41□□□□□ -2.48
TTC28Q96AY4 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU6-454P-201ENST00000364292 107 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU6-660P-201ENST00000364566 109 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU6-442P-201ENST00000383968 104 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 SNORD38B-201ENST00000384690 67 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU6-101P-201ENST00000410323 104 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 MTCO2P27-201ENST00000420740 428 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 MTND3P23-201ENST00000431980 347 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 SNRPGP10-201ENST00000432323 225 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU7-180P-201ENST00000459240 63 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 SCOCP1-201ENST00000554676 349 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.42□□□□□ -2.48
TTC28Q96AY4 AL021368.1-201ENST00000607490 540 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms