Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-CQ95604 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-CQ95604 MIR196B-201ENST00000384852 84 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 RNU6-913P-201ENST00000390913 95 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 MIR887-201ENST00000401258 79 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 Y_RNA.607-201ENST00000410597 98 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 BX510359.4-201ENST00000423750 193 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 AC092427.1-202ENST00000430569 476 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 snoU13.26-201ENST00000459452 105 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 RN7SL93P-201ENST00000463035 293 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 MIR4662A-201ENST00000637499 67 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 AC006160.2-201ENST00000637708 154 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-CQ95604 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-CQ95604 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-CQ95604 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-CQ95604 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-CQ95604 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-CQ95604 RNU6-509P-201ENST00000363519 107 ntBASIC3.23□□□□□ -1.89
HLA-CQ95604 SNORA32-201ENST00000384072 121 ntBASIC3.23□□□□□ -1.89
HLA-CQ95604 MIR660-201ENST00000385235 97 ntBASIC3.23□□□□□ -1.89
HLA-CQ95604 SCARNA16.3-201ENST00000516595 184 ntBASIC3.23□□□□□ -1.89
HLA-CQ95604 RNA5SP481-201ENST00000516814 122 ntBASIC3.23□□□□□ -1.89
HLA-CQ95604 RNU7-35P-201ENST00000517174 62 ntBASIC3.23□□□□□ -1.89
HLA-CQ95604 MIR548AR-201ENST00000582191 57 ntBASIC3.23□□□□□ -1.89
HLA-CQ95604 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-CQ95604 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HLA-CQ95604 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-633P-201ENST00000362612 103 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 Y_RNA.313-201ENST00000365095 103 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNY1P4-201ENST00000384595 115 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-447P-201ENST00000410293 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-1118P-201ENST00000410382 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-1076P-201ENST00000410397 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-355P-201ENST00000410427 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-791P-201ENST00000410467 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-705P-201ENST00000410601 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-1100P-201ENST00000410691 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNA5SP229-201ENST00000410809 99 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-860P-201ENST00000410860 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-1217P-201ENST00000411276 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 RNU6-785P-201ENST00000411324 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 MIR4425-201ENST00000580572 84 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-CQ95604 U6.90-201ENST00000614007 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 U6.70-201ENST00000620287 104 ntBASIC3.22□□□□□ -1.89
HLA-CQ95604 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-CQ95604 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-CQ95604 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-CQ95604 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
HLA-CQ95604 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-CQ95604 RNU6-851P-201ENST00000384565 107 ntBASIC3.21□□□□□ -1.9
HLA-CQ95604 RNU6-1190P-201ENST00000410811 104 ntBASIC3.21□□□□□ -1.9
HLA-CQ95604 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-CQ95604 AC103810.7-201ENST00000607821 91 ntBASIC3.21□□□□□ -1.9
HLA-CQ95604 MIR8055-201ENST00000610739 97 ntBASIC3.21□□□□□ -1.9
HLA-CQ95604 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-CQ95604 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-CQ95604 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-CQ95604 RNU6-1163P-201ENST00000364516 107 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 MIR206-201ENST00000384872 86 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 RNU11-3P-201ENST00000391111 133 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 AC087499.2-201ENST00000432861 149 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 UBL5P1-201ENST00000507979 193 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 AC008413.1-201ENST00000511864 177 ntBASIC3.2□□□□□ -1.9
HLA-CQ95604 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-CQ95604 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-CQ95604 Y_RNA.4-201ENST00000362333 112 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 RNU1-148P-201ENST00000384472 162 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 SNORA48.1-201ENST00000390879 135 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 SNORD28B-201ENST00000390993 75 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 Y_RNA.611-201ENST00000410682 108 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 RPS29P28-201ENST00000446439 141 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 AC079600.2-201ENST00000550076 130 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 MIR4709-201ENST00000577272 72 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 MIR548BB-201ENST00000626714 66 ntBASIC3.19□□□□□ -1.9
HLA-CQ95604 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-CQ95604 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-CQ95604 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-CQ95604 MIR184-201ENST00000384962 84 ntBASIC3.18□□□□□ -1.9
HLA-CQ95604 AL161932.1-201ENST00000437408 146 ntBASIC3.18□□□□□ -1.9
HLA-CQ95604 AL513328.1-201ENST00000446460 224 ntBASIC3.18□□□□□ -1.9
HLA-CQ95604 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-CQ95604 AC021506.2-201ENST00000612354 169 ntBASIC3.18□□□□□ -1.9
HLA-CQ95604 Z97988.1-201ENST00000637697 135 ntBASIC3.18□□□□□ -1.9
HLA-CQ95604 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-CQ95604 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HLA-CQ95604 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
HLA-CQ95604 RNU6-1244P-201ENST00000363614 108 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 SNORD38.2-201ENST00000384470 69 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 MIR1283-2-201ENST00000408621 87 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 RNU2-7P-201ENST00000410794 178 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 RNU6-1086P-201ENST00000410930 100 ntBASIC3.17□□□□□ -1.9
HLA-CQ95604 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-CQ95604 AC073261.1-201ENST00000429409 121 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms