Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
SH3RF3Q8TEJ3 MIR6845-201ENST00000613182 61 ntBASIC2.38□□□□□ -2.03
SH3RF3Q8TEJ3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.38□□□□□ -2.03
SH3RF3Q8TEJ3 AC018630.2-201ENST00000534866 2403 ntBASIC2.38□□□□□ -2.03
SH3RF3Q8TEJ3 MIR126-201ENST00000362291 85 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNA5SP99-201ENST00000364020 114 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA25B-201ENST00000365507 128 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNA5SP467-201ENST00000391274 118 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 MIR548O-201ENST00000408583 114 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 HMGN2P23-201ENST00000456759 269 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNU7-164P-201ENST00000459221 62 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNU7-25P-201ENST00000516544 62 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 SNORD36C-201ENST00000516733 66 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNA5SP137-201ENST00000516833 135 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-295P-201ENST00000516901 104 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-341P-201ENST00000516973 96 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 AC026271.5-201ENST00000577873 130 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 AC087685.1-201ENST00000587507 141 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 AC006441.5-201ENST00000612680 209 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 MIR6079-201ENST00000635807 62 ntBASIC2.37□□□□□ -2.03
SH3RF3Q8TEJ3 Y_RNA.37-201ENST00000362606 108 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-1099P-201ENST00000363533 107 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA33-201ENST00000363664 130 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA63D-201ENST00000364359 132 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 RNA5SP160-201ENST00000364866 120 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA6-201ENST00000384033 151 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 RNY1P6-201ENST00000384193 109 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA31.4-201ENST00000516049 129 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 SCARNA23-201ENST00000516060 130 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 AL358944.1-201ENST00000528537 144 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.36□□□□□ -2.03
SH3RF3Q8TEJ3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 RNY3P2-201ENST00000362918 102 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 Y_RNA.221-201ENST00000364248 96 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 MIR1253-201ENST00000408273 105 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 RPL23AP42-201ENST00000471152 471 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 AC022137.1-201ENST00000483735 151 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 DEFB131E-201ENST00000532329 154 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 MIR4529-201ENST00000578110 78 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 AC007229.1-201ENST00000590455 412 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 HSPE1P19-201ENST00000603327 295 ntBASIC2.35□□□□□ -2.03
SH3RF3Q8TEJ3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA1B-201ENST00000362535 133 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU1-23P-201ENST00000363361 144 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-743P-201ENST00000364151 106 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-268P-201ENST00000364174 107 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-546P-201ENST00000383991 107 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 MIR759-201ENST00000390224 91 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-816P-201ENST00000390914 107 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA40.18-201ENST00000391200 128 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-1268P-201ENST00000391214 107 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 U8.17-201ENST00000391292 132 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-1239P-201ENST00000391310 107 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 AC099677.2-201ENST00000436385 175 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 AC003989.2-201ENST00000440224 169 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RPL39P25-201ENST00000449384 154 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 SNORA4.4-201ENST00000515921 135 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-991P-201ENST00000516168 107 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU6-521P-201ENST00000516663 105 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 RNU7-193P-201ENST00000516723 65 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 MIR3163-201ENST00000581592 73 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 MIR4305-201ENST00000583252 102 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 AC087741.2-201ENST00000619415 172 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 MIR338-201ENST00000636369 67 ntBASIC2.34□□□□□ -2.03
SH3RF3Q8TEJ3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
SH3RF3Q8TEJ3 Y_RNA.73-201ENST00000362910 113 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 SNORD115-28-201ENST00000363931 81 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 AL353689.1-201ENST00000438895 199 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 AC079804.2-201ENST00000490376 200 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 MIR3683-201ENST00000580847 82 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 MIR4762-201ENST00000585261 75 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 MIR6895-201ENST00000613497 78 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 AC012531.4-201ENST00000616509 177 ntBASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
SH3RF3Q8TEJ3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 Y_RNA.244-201ENST00000364484 109 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 RNU6-675P-201ENST00000384236 104 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 MIR583-201ENST00000384846 75 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 SNORA26.9-201ENST00000391322 122 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 AC019129.1-201ENST00000403786 261 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 MIR1912-201ENST00000410389 80 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 Y_RNA.601-201ENST00000410500 113 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 AC096949.1-201ENST00000412047 152 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 AL353813.1-201ENST00000440700 253 ntBASIC2.32□□□□□ -2.04
SH3RF3Q8TEJ3 RNU1-131P-201ENST00000458943 161 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms