Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC087499.4-201ENST00000448505 178 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 RNU7-185P-201ENST00000459215 60 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 AP000942.4-201ENST00000604811 241 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 U6.90-201ENST00000614007 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.03□□□□□ -2.4
LMX1AQ8TE12 U6.70-201ENST00000620287 104 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 uc_338.16-201ENST00000621804 95 ntBASIC0.03□□□□□ -2.4
LMX1AQ8TE12 SNORA72.1-201ENST00000363485 129 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.222-201ENST00000364264 102 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-144P-201ENST00000383951 107 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-1040P-201ENST00000383974 107 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-187P-201ENST00000384139 106 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.496-201ENST00000384444 101 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 SNORD116-29-201ENST00000384516 83 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-1165P-201ENST00000410119 107 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-602P-201ENST00000411155 105 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU7-67P-201ENST00000459003 62 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.655-201ENST00000515919 96 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-559P-201ENST00000516151 98 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU7-149P-201ENST00000516739 59 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU7-110P-201ENST00000516891 62 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 RNU7-156P-201ENST00000517214 74 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 AC133104.2-201ENST00000615272 193 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 AC099654.14-201ENST00000638599 341 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 AC010332.2-201ENST00000613083 1904 ntBASIC0.02□□□□□ -2.41
LMX1AQ8TE12 MIR30D-201ENST00000362283 70 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.383-201ENST00000383855 97 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 MIR588-201ENST00000384900 83 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 RNU6-1248P-201ENST00000391096 64 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 AL160004.2-201ENST00000432935 350 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 RNU7-152P-201ENST00000458982 64 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 SNORA40.14-201ENST00000516543 86 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 RNU6-958P-201ENST00000516995 106 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 RNU6-448P-201ENST00000517052 107 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.01□□□□□ -2.41
LMX1AQ8TE12 AC112693.2-201ENST00000556538 232 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 RNU1-29P-201ENST00000606574 126 ntBASIC0.01□□□□□ -2.41
LMX1AQ8TE12 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.01□□□□□ -2.41
LMX1AQ8TE12 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0□□□□□ -2.41
LMX1AQ8TE12 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6-899P-201ENST00000363947 107 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.241-201ENST00000364470 117 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.428-201ENST00000384078 102 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6-364P-201ENST00000384387 107 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNA5SP496-201ENST00000391240 109 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU4-30P-201ENST00000410245 143 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6-1190P-201ENST00000410811 104 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.617-201ENST00000410920 90 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.666-201ENST00000516187 112 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6-277P-201ENST00000516272 106 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6-191P-201ENST00000516295 94 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6-1232P-201ENST00000516299 86 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.718-201ENST00000517110 102 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 AC131281.1-201ENST00000522984 164 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 AC133485.4-201ENST00000561835 220 ntBASIC0□□□□□ -2.41
LMX1AQ8TE12 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 RNU4-80P-201ENST00000363200 141 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 SNORD115-28-201ENST00000363931 81 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 RNU1-115P-201ENST00000365329 160 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 RNU6-756P-201ENST00000383997 107 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 RNU6-937P-201ENST00000384325 106 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 MIR548A2-201ENST00000384956 97 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 MT-TF-201ENST00000387314 71 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 RNY4P36-201ENST00000391116 96 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 RNU2-59P-201ENST00000410482 191 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 AC069271.1-201ENST00000445577 156 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 U8.20-201ENST00000459445 131 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 SEPT14P8-201ENST00000508026 178 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 SNORD116.3-201ENST00000517176 78 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 SNORD113-5-201ENST00000607261 78 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 MIR6759-201ENST00000638110 65 ntBASIC-0.01□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 RNA5SP117-201ENST00000365294 118 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 SNORA27-201ENST00000384323 126 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-35P-201ENST00000384530 107 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-308P-201ENST00000390957 107 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 SNORA26-201ENST00000391286 122 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 MIR1257-201ENST00000408490 117 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 RPS29P24-201ENST00000486345 171 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 SNORD77.4-201ENST00000516158 81 ntBASIC-0.02□□□□□ -2.41
LMX1AQ8TE12 RNU6-764P-201ENST00000516396 105 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms