Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.36□□□□□ -2.19
USP38Q8NB14 Y_RNA.680-201ENST00000516441 93 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 RNU7-25P-201ENST00000516544 62 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 RNU6-113P-201ENST00000516653 101 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 RNU6-453P-201ENST00000516819 85 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 MIR548AR-201ENST00000582191 57 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 MIR3192-201ENST00000584920 77 ntBASIC1.36□□□□□ -2.19
USP38Q8NB14 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
USP38Q8NB14 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.36□□□□□ -2.19
USP38Q8NB14 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USP38Q8NB14 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USP38Q8NB14 snoU2_19.4-201ENST00000364329 80 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 SNORA20.1-201ENST00000364790 130 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 Y_RNA.307-201ENST00000365022 117 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 Y_RNA.308-201ENST00000365043 101 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 Y_RNA.486-201ENST00000384398 107 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 MIR570-201ENST00000384917 97 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 RNU6-910P-201ENST00000390844 107 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 U8.17-201ENST00000391292 132 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 AL606845.1-201ENST00000404881 255 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 RNU7-41P-201ENST00000515917 61 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 SNORA31.4-201ENST00000516049 129 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 RNY3P16-201ENST00000516338 101 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 RNU7-43P-201ENST00000516554 64 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 SNORA70.22-201ENST00000517160 124 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 MIR4662B-201ENST00000579498 81 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 AC008133.2-201ENST00000624540 351 ntBASIC1.35□□□□□ -2.19
USP38Q8NB14 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.34□□□□□ -2.19
USP38Q8NB14 Y_RNA.60-201ENST00000362831 98 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 SNORA25.3-201ENST00000363205 127 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 RNU6-1138P-201ENST00000365359 106 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 RNU4-17P-201ENST00000365598 141 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 Y_RNA.447-201ENST00000384184 113 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 SNORD28B-201ENST00000390993 75 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 RNU2-70P-201ENST00000410718 179 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 AC245047.7-201ENST00000440265 293 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 RNU6-1299P-201ENST00000516316 100 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 RNU7-40P-201ENST00000516397 64 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 AC090821.2-201ENST00000523552 176 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 MIR1273G-201ENST00000577677 100 ntBASIC1.34□□□□□ -2.19
USP38Q8NB14 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
USP38Q8NB14 RNU6-493P-201ENST00000391321 108 ntBASIC1.33□□□□□ -2.2
USP38Q8NB14 AL133373.1-201ENST00000497098 94 ntBASIC1.33□□□□□ -2.2
USP38Q8NB14 SCARNA8-201ENST00000515924 131 ntBASIC1.33□□□□□ -2.2
USP38Q8NB14 RNU6-693P-201ENST00000516134 107 ntBASIC1.33□□□□□ -2.2
USP38Q8NB14 RNU6-365P-201ENST00000517113 106 ntBASIC1.33□□□□□ -2.2
USP38Q8NB14 AL022345.2-201ENST00000606307 135 ntBASIC1.33□□□□□ -2.2
USP38Q8NB14 MIR373-201ENST00000362273 69 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 RNU6-653P-201ENST00000363074 106 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 RNU6-923P-201ENST00000364753 107 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 Y_RNA.478-201ENST00000384358 107 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 SNORA25-201ENST00000384384 134 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 Y_RNA.539-201ENST00000384635 107 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 Y_RNA.547-201ENST00000384654 119 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 RNU6-1067P-201ENST00000384752 107 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 MIR616-201ENST00000385293 97 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 HAR1A.1-201ENST00000459583 118 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.32□□□□□ -2.2
USP38Q8NB14 RNU6-830P-201ENST00000516353 107 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 RNU6-1270P-201ENST00000517128 108 ntBASIC1.32□□□□□ -2.2
USP38Q8NB14 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.32□□□□□ -2.2
USP38Q8NB14 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.32□□□□□ -2.2
USP38Q8NB14 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
USP38Q8NB14 Y_RNA.20-201ENST00000362479 113 ntBASIC1.31□□□□□ -2.2
USP38Q8NB14 Y_RNA.370-201ENST00000365589 108 ntBASIC1.31□□□□□ -2.2
USP38Q8NB14 RPS23P4-201ENST00000487908 423 ntBASIC1.31□□□□□ -2.2
USP38Q8NB14 AC011921.3-201ENST00000605540 361 ntBASIC1.31□□□□□ -2.2
USP38Q8NB14 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
USP38Q8NB14 SNORA1.2-201ENST00000365189 134 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 Y_RNA.432-201ENST00000384087 111 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 RNU6-1228P-201ENST00000391014 107 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 snosnR66.1-201ENST00000391095 99 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 RNU6-381P-201ENST00000391259 108 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 RNU6-1023P-201ENST00000516137 106 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 RNA5SP395-201ENST00000516567 118 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 RNU6-126P-201ENST00000516685 103 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 RNU6-111P-201ENST00000517179 105 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 AC004817.2-201ENST00000561794 651 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 MIR4251-201ENST00000635819 61 ntBASIC1.3□□□□□ -2.2
USP38Q8NB14 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
USP38Q8NB14 MIR103A2-201ENST00000362154 78 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 Y_RNA.241-201ENST00000364470 117 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 Y_RNA.330-201ENST00000365230 109 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 RNY4P28-201ENST00000365281 93 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 SNORA26-201ENST00000391286 122 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 SNRPGP8-201ENST00000454064 226 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 RNU4-57P-201ENST00000515980 135 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 RN7SKP179-201ENST00000516126 217 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 AL020996.3-201ENST00000606617 222 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 AL391903.3-201ENST00000612158 163 ntBASIC1.29□□□□□ -2.2
USP38Q8NB14 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.28□□□□□ -2.2
USP38Q8NB14 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
USP38Q8NB14 Y_RNA.91-201ENST00000363042 107 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 SNORD45.3-201ENST00000363836 72 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 SNORD115-28-201ENST00000363931 81 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 RNA5SP48-201ENST00000363969 126 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms