Protein–RNA interactions for Protein: Q8N6Y0

USHBP1, Usher syndrome type-1C protein-binding protein 1, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1Q8N6Y0 RNU6-32P-201ENST00000383948 107 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 RNU6-13P-201ENST00000384248 107 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 RNU6-106P-201ENST00000384405 107 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 Y_RNA.495-201ENST00000384435 112 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 RNU6-12P-201ENST00000384604 107 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 RNU6-41P-201ENST00000384741 107 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 SNORD12C-201ENST00000386307 89 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 RNU11-3P-201ENST00000391111 133 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 AL627390.1-201ENST00000396055 340 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 AC084768.2-201ENST00000622736 221 ntBASIC2.51□□□□□ -2.01
USHBP1Q8N6Y0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 MIRLET7C-201ENST00000362160 84 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 MIR450A1-201ENST00000362262 91 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 RNA5SP190-201ENST00000365222 118 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 RNY1P6-201ENST00000384193 109 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 Y_RNA.454-201ENST00000384224 113 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 SNORA31.10-201ENST00000516482 106 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 Y_RNA.694-201ENST00000516677 117 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 MIR5094-201ENST00000578766 85 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 uc_338.28-201ENST00000612082 187 ntBASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
USHBP1Q8N6Y0 SNORA3A-201ENST00000364113 130 ntBASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 Y_RNA.213-201ENST00000364178 111 ntBASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 RNU6-950P-201ENST00000384651 107 ntBASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 U8.17-201ENST00000391292 132 ntBASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 RPS29P24-201ENST00000486345 171 ntBASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 RNU6-830P-201ENST00000516353 107 ntBASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 AC021443.1-201ENST00000604478 211 ntBASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
USHBP1Q8N6Y0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USHBP1Q8N6Y0 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
USHBP1Q8N6Y0 Y_RNA.549-201ENST00000384657 102 ntBASIC2.48□□□□□ -2.01
USHBP1Q8N6Y0 AL034345.1-201ENST00000407768 123 ntBASIC2.48□□□□□ -2.01
USHBP1Q8N6Y0 RNY4P20-201ENST00000516678 93 ntBASIC2.48□□□□□ -2.01
USHBP1Q8N6Y0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.48□□□□□ -2.01
USHBP1Q8N6Y0 AL589743.1-201ENST00000551932 2712 ntBASIC2.48□□□□□ -2.01
USHBP1Q8N6Y0 Y_RNA.298-201ENST00000364960 107 ntBASIC2.47□□□□□ -2.01
USHBP1Q8N6Y0 MIR1302-5-201ENST00000408164 150 ntBASIC2.47□□□□□ -2.01
USHBP1Q8N6Y0 AC015922.2-201ENST00000435593 184 ntBASIC2.47□□□□□ -2.01
USHBP1Q8N6Y0 RNU7-164P-201ENST00000459221 62 ntBASIC2.47□□□□□ -2.01
USHBP1Q8N6Y0 AC106754.2-201ENST00000623006 233 ntBASIC2.47□□□□□ -2.01
USHBP1Q8N6Y0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 AL596211.1-201ENST00000569873 2277 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 Y_RNA.49-201ENST00000362714 112 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-833P-201ENST00000363486 107 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-424P-201ENST00000384367 105 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-554P-201ENST00000410466 106 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 SUMO2P16-201ENST00000519475 264 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 AC002984.1-201ENST00000591692 448 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 AC091932.4-201ENST00000623386 200 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 MIR203B-201ENST00000636080 86 ntBASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USHBP1Q8N6Y0 SNORA63.5-201ENST00000363548 123 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-1014P-201ENST00000383940 103 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 SNORA27-201ENST00000384323 126 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 MIR597-201ENST00000384968 97 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 SNORA25.15-201ENST00000516487 89 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 MIR4498-201ENST00000577599 66 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 MIR4305-201ENST00000583252 102 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-94P-201ENST00000607728 107 ntBASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USHBP1Q8N6Y0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-414P-201ENST00000363705 104 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 SNORA63D-201ENST00000364359 132 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 Y_RNA.241-201ENST00000364470 117 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 U8.16-201ENST00000391279 133 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 RNA5SP247-201ENST00000411181 105 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 Y_RNA.677-201ENST00000516401 85 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 RNA5SP168-201ENST00000516642 112 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-537P-201ENST00000517277 103 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 MIR3683-201ENST00000580847 82 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 AC006254.2-201ENST00000603259 279 ntBASIC2.44□□□□□ -2.02
USHBP1Q8N6Y0 MIR342-201ENST00000362212 99 ntBASIC2.43□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-661P-201ENST00000362409 107 ntBASIC2.43□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-766P-201ENST00000362478 107 ntBASIC2.43□□□□□ -2.02
USHBP1Q8N6Y0 Y_RNA.163-201ENST00000363702 113 ntBASIC2.43□□□□□ -2.02
USHBP1Q8N6Y0 Y_RNA.323-201ENST00000365157 109 ntBASIC2.43□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-756P-201ENST00000383997 107 ntBASIC2.43□□□□□ -2.02
USHBP1Q8N6Y0 RNU6-1113P-201ENST00000384348 107 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms