Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 Y_RNA.37-201ENST00000362606 108 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 Y_RNA.218-201ENST00000364218 104 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-915P-201ENST00000364943 103 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 MIR526A1-201ENST00000384897 85 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 MIR624-201ENST00000385217 97 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 SNORD36C-201ENST00000516733 66 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-1234P-201ENST00000516877 103 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 MIR4713-201ENST00000582691 75 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 AC131055.1-201ENST00000584626 316 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 AL645939.4-201ENST00000604495 135 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 AL365222.1-201ENST00000614661 98 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 MIR376A2-201ENST00000636782 80 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 MTND5P32-201ENST00000560711 1802 ntBASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.72□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 MIR194-1-201ENST00000384892 85 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 MIR1267-201ENST00000408723 78 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 RNU7-181P-201ENST00000517234 74 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 RNU2-60P-201ENST00000517290 128 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 AP001328.1-201ENST00000528550 176 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 MIR5694-201ENST00000581190 76 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 FAM106DP-201ENST00000586416 501 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.71□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.52-201ENST00000362760 96 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.261-201ENST00000364631 102 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-1292P-201ENST00000383856 107 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 RNU4-52P-201ENST00000384209 138 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 MIR136-201ENST00000385207 82 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 MIR548I2-201ENST00000408348 149 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-938P-201ENST00000411285 103 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 RNU4-57P-201ENST00000515980 135 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 MIR4255-201ENST00000579351 72 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 AC011603.4-201ENST00000611325 277 ntBASIC1.7□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-1189P-201ENST00000383958 107 ntBASIC1.69□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.525-201ENST00000384570 113 ntBASIC1.69□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
SFTPA1Q8IWL2 RNU7-95P-201ENST00000459222 64 ntBASIC1.69□□□□□ -2.14
SFTPA1Q8IWL2 SNORA18.7-201ENST00000516910 131 ntBASIC1.69□□□□□ -2.14
SFTPA1Q8IWL2 AP003484.1-201ENST00000530974 250 ntBASIC1.69□□□□□ -2.14
SFTPA1Q8IWL2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.71-201ENST00000362892 104 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.291-201ENST00000364886 113 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-22P-201ENST00000384355 107 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-1117P-201ENST00000384525 104 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 MIR513A1-201ENST00000385138 129 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 U8.17-201ENST00000391292 132 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 AL161935.2-201ENST00000414627 60 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 RNU5E-3P-201ENST00000515913 68 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-830P-201ENST00000516353 107 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-1149P-201ENST00000516810 97 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 MIR8074-201ENST00000615081 81 ntBASIC1.68□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-235P-201ENST00000362644 107 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.241-201ENST00000364470 117 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 SNORA2.2-201ENST00000365473 135 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 SNORD18B-201ENST00000365659 72 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.410-201ENST00000383992 113 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 MIR676-201ENST00000390702 67 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 MIR1323-201ENST00000408090 73 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 RNA5SP489-201ENST00000410986 109 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 AL356379.1-201ENST00000414105 126 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 HMGN2P19-201ENST00000425149 265 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 RNU7-107P-201ENST00000459121 61 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 RPS27P21-201ENST00000486977 252 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-917P-201ENST00000516294 104 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 MIR5197-201ENST00000583721 112 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 AC103810.8-201ENST00000607347 118 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 AP001340.1-201ENST00000624405 217 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
SFTPA1Q8IWL2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 RNU6-309P-201ENST00000364573 106 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.494-201ENST00000384432 111 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 SNORA22C-201ENST00000384614 134 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 SNORD123-201ENST00000459473 70 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 AC005908.1-201ENST00000468701 347 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 Y_RNA.690-201ENST00000516603 95 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 SNORA77B-201ENST00000578179 125 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 U7.2-201ENST00000607576 63 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 AL627230.6-201ENST00000611129 280 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 MIR8063-201ENST00000621930 81 ntBASIC1.66□□□□□ -2.14
SFTPA1Q8IWL2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.65□□□□□ -2.14
SFTPA1Q8IWL2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SFTPA1Q8IWL2 MIR342-201ENST00000362212 99 ntBASIC1.65□□□□□ -2.15
SFTPA1Q8IWL2 Y_RNA.120-201ENST00000363304 110 ntBASIC1.65□□□□□ -2.15
SFTPA1Q8IWL2 Y_RNA.440-201ENST00000384120 114 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms