Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC109810.1-201ENST00000534066 224 ntBASIC0.93□□□□□ -2.26
CCDC60Q8IWA6 CYP3A137P-201ENST00000562436 69 ntBASIC0.93□□□□□ -2.26
CCDC60Q8IWA6 MIR5688-201ENST00000580619 83 ntBASIC0.93□□□□□ -2.26
CCDC60Q8IWA6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.93□□□□□ -2.26
CCDC60Q8IWA6 SEPT14P17-201ENST00000617978 177 ntBASIC0.93□□□□□ -2.26
CCDC60Q8IWA6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 Y_RNA.288-201ENST00000364854 92 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 MT-TT-201ENST00000387460 66 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 Y_RNA.622-201ENST00000411091 108 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 SCARNA8-201ENST00000515924 131 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 RNU6-693P-201ENST00000516134 107 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 RNA5SP220-201ENST00000516298 104 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 RNU6-1270P-201ENST00000517128 108 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 MIR4791-201ENST00000607666 84 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 AC022709.1-201ENST00000615967 87 ntBASIC0.92□□□□□ -2.26
CCDC60Q8IWA6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 Y_RNA.241-201ENST00000364470 117 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 Y_RNA.352-201ENST00000365439 102 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 Y_RNA.416-201ENST00000384014 113 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 RNU6-365P-201ENST00000517113 106 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 AC007751.1-201ENST00000529260 376 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 AC108706.1-201ENST00000611053 297 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 AC243994.1-201ENST00000618627 109 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 MIR7111-201ENST00000619751 72 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 AL365265.1-201ENST00000621045 234 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 MTND1P7-201ENST00000632801 297 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CCDC60Q8IWA6 SNORD115-28-201ENST00000363931 81 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 snoU2_19.4-201ENST00000364329 80 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.518-201ENST00000384552 113 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.537-201ENST00000384626 109 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 MIR489-201ENST00000384923 84 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 RNU2-70P-201ENST00000410718 179 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 RNU6-847P-201ENST00000411115 108 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 MTCYBP9-201ENST00000431021 303 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 snoU13.18-201ENST00000459483 104 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 AC107297.1-201ENST00000459991 176 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 RNU6-1299P-201ENST00000516316 100 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 RNU6-1045P-201ENST00000516321 107 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 RNU6-453P-201ENST00000516819 85 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 MIR4643-201ENST00000577473 78 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 MIR6734-201ENST00000621166 68 ntBASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC60Q8IWA6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.199-201ENST00000364014 102 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 RNU6-654P-201ENST00000364373 107 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.304-201ENST00000365011 112 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.354-201ENST00000365448 111 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 RNU6-42P-201ENST00000384165 107 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 SNORD61-201ENST00000384252 73 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 AL606845.1-201ENST00000404881 255 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 MIR1302-3-201ENST00000408128 138 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 MIR1302-7-201ENST00000408841 72 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 SNORD127-201ENST00000458892 86 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 MIR548AO-201ENST00000579992 96 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 MIR4282-201ENST00000583613 67 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
CCDC60Q8IWA6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.91-201ENST00000363042 107 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.133-201ENST00000363428 110 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 SNORD27-201ENST00000363981 72 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.494-201ENST00000384432 111 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 MIR518F-201ENST00000384973 87 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 MIR548H3-201ENST00000408771 118 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 RNA5SP95-201ENST00000410319 137 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 AC004941.2-201ENST00000427009 228 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 AL118496.2-201ENST00000448300 230 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 RNU7-67P-201ENST00000459003 62 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 RNU6-126P-201ENST00000516685 103 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 MIR4719-201ENST00000585233 84 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 MIR6516-201ENST00000630554 81 ntBASIC0.88□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.76-201ENST00000362931 109 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 RNU4-17P-201ENST00000365598 141 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 SNORD24-201ENST00000383884 75 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.432-201ENST00000384087 111 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 Y_RNA.477-201ENST00000384352 108 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 MIR548A2-201ENST00000384956 97 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 MIR568-201ENST00000385036 95 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 MIR616-201ENST00000385293 97 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
CCDC60Q8IWA6 AL392103.1-201ENST00000447000 198 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 391.5 ms