Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 POLR2J4-204ENST00000418424 324 ntBASIC2.9□□□□□ -1.95
TRIM50Q86XT4 SNORA72.7-201ENST00000516349 94 ntBASIC2.9□□□□□ -1.95
TRIM50Q86XT4 SNORA40.13-201ENST00000516379 120 ntBASIC2.9□□□□□ -1.95
TRIM50Q86XT4 AC103810.6-201ENST00000606708 136 ntBASIC2.9□□□□□ -1.95
TRIM50Q86XT4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM50Q86XT4 RNU1-51P-201ENST00000365345 176 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 SNORD28B-201ENST00000390993 75 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 SNORD123-201ENST00000459473 70 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 RPS23P4-201ENST00000487908 423 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 AC008413.1-201ENST00000511864 177 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 RNU7-53P-201ENST00000516705 60 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 U1.36-201ENST00000620684 176 ntBASIC2.89□□□□□ -1.95
TRIM50Q86XT4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRIM50Q86XT4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 RPS29P29-201ENST00000456396 171 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 RNU7-113P-201ENST00000459273 62 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 RNU6-826P-201ENST00000516827 104 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 MIR3945-201ENST00000581853 98 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 MIR548AR-201ENST00000582191 57 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 AC087741.2-201ENST00000619415 172 ntBASIC2.88□□□□□ -1.95
TRIM50Q86XT4 RNA5SP289-201ENST00000362332 137 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 SNORA3A-201ENST00000364113 130 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 MIR1912-201ENST00000410389 80 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 RNA5SP508-201ENST00000411327 119 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 RNU6-970P-201ENST00000516312 107 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 MIR4791-201ENST00000607666 84 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 AC095038.3-201ENST00000634439 195 ntBASIC2.87□□□□□ -1.95
TRIM50Q86XT4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TRIM50Q86XT4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRIM50Q86XT4 RNU6-1131P-201ENST00000364955 107 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 RNU6-1319P-201ENST00000390855 104 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 RNU6-747P-201ENST00000390928 104 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 RNU6-241P-201ENST00000391148 104 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 RNA5SP450-201ENST00000411206 102 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 RNU6-177P-201ENST00000411257 104 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 AC113410.1-201ENST00000505029 247 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 MIR3152-201ENST00000579801 74 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 FAM106DP-201ENST00000586416 501 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 AC243994.1-201ENST00000618627 109 ntBASIC2.86□□□□□ -1.95
TRIM50Q86XT4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRIM50Q86XT4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TRIM50Q86XT4 MIR424-201ENST00000362227 98 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 SNORA22.1-201ENST00000362701 134 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 RNU6-1190P-201ENST00000410811 104 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 RNA5SP100-201ENST00000410903 110 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 RNA5SP59-201ENST00000410922 110 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM50Q86XT4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.85□□□□□ -1.95
TRIM50Q86XT4 RNU6-457P-201ENST00000363999 107 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 RNA5SP210-201ENST00000391034 120 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 RNU6-893P-201ENST00000458841 100 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 RNU6-904P-201ENST00000516206 101 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 RNU7-193P-201ENST00000516723 65 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 SNORA31.25-201ENST00000517242 134 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 MIR3618-201ENST00000580330 88 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 Y_RNA.773-201ENST00000607168 90 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 MIR203B-201ENST00000636080 86 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 MIR1255B1-201ENST00000636325 63 ntBASIC2.84□□□□□ -1.95
TRIM50Q86XT4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM50Q86XT4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM50Q86XT4 RNU6-661P-201ENST00000362409 107 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 MIR27B-201ENST00000385129 97 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 RNU6-913P-201ENST00000390913 95 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 RNU2-13P-201ENST00000515909 113 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 SNORA31.15-201ENST00000516771 132 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 SNORA31.17-201ENST00000516953 127 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 MIR4446-201ENST00000578505 67 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 FO624990.1-201ENST00000636373 85 ntBASIC2.83□□□□□ -1.96
TRIM50Q86XT4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
TRIM50Q86XT4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
TRIM50Q86XT4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM50Q86XT4 Y_RNA.299-201ENST00000364973 94 ntBASIC2.82□□□□□ -1.96
TRIM50Q86XT4 RNU1-52P-201ENST00000384190 164 ntBASIC2.82□□□□□ -1.96
TRIM50Q86XT4 RNU4-69P-201ENST00000410677 143 ntBASIC2.82□□□□□ -1.96
TRIM50Q86XT4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.82□□□□□ -1.96
TRIM50Q86XT4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM50Q86XT4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.82□□□□□ -1.96
TRIM50Q86XT4 MIR4529-201ENST00000578110 78 ntBASIC2.82□□□□□ -1.96
TRIM50Q86XT4 AL590808.1-201ENST00000618696 141 ntBASIC2.82□□□□□ -1.96
TRIM50Q86XT4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 SNORD114-30-201ENST00000364448 72 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 SNORA24-201ENST00000384096 131 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 RNU6-49P-201ENST00000384256 107 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 Y_RNA.470-201ENST00000384307 117 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 RNA5SP261-201ENST00000410536 106 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 RNA5SP33-201ENST00000516687 98 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 DEFB131E-201ENST00000532329 154 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 U4.3-201ENST00000621047 82 ntBASIC2.81□□□□□ -1.96
TRIM50Q86XT4 MIR6717-201ENST00000622747 73 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms