Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.44□□□□□ -2.18
SFR1Q86XK3 AC015922.2-201ENST00000435593 184 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 HMGN2P32-201ENST00000444648 269 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 AC092991.1-201ENST00000477176 376 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 SNORA44.1-201ENST00000517031 108 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 RNU6-365P-201ENST00000517113 106 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 MIR378D2-201ENST00000580636 98 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 MIR8070-201ENST00000616510 88 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 MIR376A2-201ENST00000636782 80 ntBASIC1.44□□□□□ -2.18
SFR1Q86XK3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SFR1Q86XK3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SFR1Q86XK3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 SNORD116-18-201ENST00000383961 92 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 MIR30A-201ENST00000385092 71 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 MIR802-201ENST00000390235 94 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 RNU6-938P-201ENST00000411285 103 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 AC107027.2-201ENST00000512197 115 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 RNU6-693P-201ENST00000516134 107 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 AC015726.2-201ENST00000620112 122 ntBASIC1.43□□□□□ -2.18
SFR1Q86XK3 RNU6-199P-201ENST00000362954 107 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 RNA5SP259-201ENST00000365541 109 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 SNORD24-201ENST00000383884 75 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 RNU6-1062P-201ENST00000383908 107 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 AF228730.3-201ENST00000436691 102 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 RNU4-57P-201ENST00000515980 135 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
SFR1Q86XK3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SFR1Q86XK3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
SFR1Q86XK3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.41□□□□□ -2.18
SFR1Q86XK3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SFR1Q86XK3 Y_RNA.506-201ENST00000384494 102 ntBASIC1.41□□□□□ -2.18
SFR1Q86XK3 Y_RNA.580-201ENST00000391004 95 ntBASIC1.41□□□□□ -2.18
SFR1Q86XK3 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
SFR1Q86XK3 SNORA79-201ENST00000408376 140 ntBASIC1.41□□□□□ -2.18
SFR1Q86XK3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.41□□□□□ -2.18
SFR1Q86XK3 RNU6-346P-201ENST00000516288 111 ntBASIC1.41□□□□□ -2.18
SFR1Q86XK3 MIR3129-201ENST00000581095 76 ntBASIC1.41□□□□□ -2.18
SFR1Q86XK3 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
SFR1Q86XK3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SFR1Q86XK3 RNU6-774P-201ENST00000363238 107 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 MIR452-201ENST00000385020 85 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 SNORD41-201ENST00000386967 70 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 SNORD77.3-201ENST00000391113 65 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 SUMO1P3-201ENST00000439961 304 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 RNU7-200P-201ENST00000516105 62 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 SNORD116-25-201ENST00000516517 92 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 RNU6-504P-201ENST00000516568 104 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 SNORD36C-201ENST00000516733 66 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 FAM106DP-201ENST00000586416 501 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 AP001485.1-201ENST00000604799 199 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
SFR1Q86XK3 WWP1P1-201ENST00000466609 2769 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 RNU6-151P-201ENST00000364158 107 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 RNU6-597P-201ENST00000365620 102 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 SNORD28B-201ENST00000390993 75 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 SNORA26-201ENST00000391286 122 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.39□□□□□ -2.19
SFR1Q86XK3 RNU6-830P-201ENST00000516353 107 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 RNU7-181P-201ENST00000517234 74 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 DNAJC19P2-201ENST00000593340 302 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 AL365205.2-201ENST00000594586 68 ntBASIC1.39□□□□□ -2.19
SFR1Q86XK3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 SNORA25.9-201ENST00000365087 128 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 RNU4-11P-201ENST00000365287 132 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 RNU6-449P-201ENST00000383914 107 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 SNORD38C-201ENST00000384381 69 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 RNU6-125P-201ENST00000384505 107 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 RNU6-588P-201ENST00000410281 105 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.38□□□□□ -2.19
SFR1Q86XK3 RNU6-126P-201ENST00000516685 103 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 RNU6-922P-201ENST00000516753 99 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 AC090821.2-201ENST00000523552 176 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 Y_RNA.778-201ENST00000620203 90 ntBASIC1.38□□□□□ -2.19
SFR1Q86XK3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.38□□□□□ -2.19
SFR1Q86XK3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SFR1Q86XK3 SNORD115-28-201ENST00000363931 81 ntBASIC1.37□□□□□ -2.19
SFR1Q86XK3 MIR136-201ENST00000385207 82 ntBASIC1.37□□□□□ -2.19
SFR1Q86XK3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SFR1Q86XK3 RNU7-197P-201ENST00000458836 62 ntBASIC1.37□□□□□ -2.19
SFR1Q86XK3 snoU13.9-201ENST00000458927 103 ntBASIC1.37□□□□□ -2.19
SFR1Q86XK3 SNORD123-201ENST00000459473 70 ntBASIC1.37□□□□□ -2.19
SFR1Q86XK3 RNA5SP272-201ENST00000516095 111 ntBASIC1.37□□□□□ -2.19
SFR1Q86XK3 SNORA18.7-201ENST00000516910 131 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms