Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 SNORD115-26-201ENST00000365067 82 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 SNORD115-10-201ENST00000365073 81 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 SNORD115-43-201ENST00000365503 82 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 Y_RNA.370-201ENST00000365589 108 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 SNORD115-36-201ENST00000365629 82 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 RNU6-1336P-201ENST00000383886 109 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 MIR548M-201ENST00000408260 86 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 SNORD36C-201ENST00000516733 66 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 MIR5197-201ENST00000583721 112 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 SNORD115-40-201ENST00000606510 82 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRTM3Q86VH5 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 RNU6-746P-201ENST00000384112 109 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 Y_RNA.506-201ENST00000384494 102 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 RNU1-78P-201ENST00000391248 165 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 RNU6-938P-201ENST00000411285 103 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 Y_RNA.703-201ENST00000516846 111 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 MIR548X2-201ENST00000579776 100 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 MIR548AR-201ENST00000582191 57 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 AC131055.1-201ENST00000584626 316 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 AL353997.5-201ENST00000618886 171 ntBASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRRTM3Q86VH5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 Y_RNA.488-201ENST00000384403 102 ntBASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 MIR520C-201ENST00000385005 87 ntBASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 AC027119.1-201ENST00000440877 241 ntBASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 RNU6-250P-201ENST00000516958 103 ntBASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LRRTM3Q86VH5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 Y_RNA.343-201ENST00000365354 112 ntBASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 SNORA27-201ENST00000384323 126 ntBASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 RNU6-482P-201ENST00000391068 107 ntBASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 Y_RNA.584-201ENST00000391090 114 ntBASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 AC245517.4-201ENST00000448601 281 ntBASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.91□□□□□ -2.1
LRRTM3Q86VH5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
LRRTM3Q86VH5 SNORA70.7-201ENST00000384159 133 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 RNU6-125P-201ENST00000384505 107 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 AL603908.1-201ENST00000406098 201 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 RPL30P7-201ENST00000479312 323 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 RPS26P48-201ENST00000491713 339 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 RNA5SP445-201ENST00000515889 115 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 AC090821.2-201ENST00000523552 176 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 MIR3133-201ENST00000583157 78 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
LRRTM3Q86VH5 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.440-201ENST00000384120 114 ntBASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.497-201ENST00000384447 98 ntBASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 SNORD28B-201ENST00000390993 75 ntBASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 SNORA25.12-201ENST00000516202 82 ntBASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 SNORD111.1-201ENST00000516421 86 ntBASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRTM3Q86VH5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.52-201ENST00000362760 96 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 RNU6-774P-201ENST00000363238 107 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 SNORD18B-201ENST00000365659 72 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.537-201ENST00000384626 109 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 RPL39P39-201ENST00000455840 151 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 RNU7-80P-201ENST00000459562 61 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 RNU7-70P-201ENST00000516941 66 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 MIR3683-201ENST00000580847 82 ntBASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.351-201ENST00000365436 96 ntBASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 SNORA17.3-201ENST00000391159 129 ntBASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 SUMO1P3-201ENST00000439961 304 ntBASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 RPS29P24-201ENST00000486345 171 ntBASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 RNU6-346P-201ENST00000516288 111 ntBASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 RNU6-1149P-201ENST00000516810 97 ntBASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 MIR376A2-201ENST00000636782 80 ntBASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.251-201ENST00000364551 99 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.454-201ENST00000384224 113 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 MIR569-201ENST00000385228 96 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 AL603825.1-201ENST00000438481 80 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 MTATP6P21-201ENST00000440681 189 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 RNU7-67P-201ENST00000459003 62 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 RNU7-96P-201ENST00000459535 64 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 293.7 ms