Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 MIR2681-201ENST00000581814 105 ntBASIC-2.64□□□□□ -2.83
LINC00643Q86TS7 AL133173.2-201ENST00000614270 90 ntBASIC-2.64□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.86-201ENST00000363020 111 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.119-201ENST00000363301 96 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 Y_RNA.430-201ENST00000384081 110 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 RNU6-1310P-201ENST00000384153 107 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 RNU6-1145P-201ENST00000384246 107 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 AC084290.1-201ENST00000434995 374 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 MTND2P3-201ENST00000452458 470 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 TRAJ51-201ENST00000504127 63 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 RNA5SP461-201ENST00000516451 104 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 MIR5583-1-201ENST00000580941 59 ntBASIC-2.65□□□□□ -2.83
LINC00643Q86TS7 SNORD57-201ENST00000448188 72 ntBASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 AC023449.1-201ENST00000454464 154 ntBASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 USP9YP23-201ENST00000455085 407 ntBASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 Vault.3-201ENST00000516676 95 ntBASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 YWHAEP3-201ENST00000582767 121 ntBASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 AL121895.2-201ENST00000619558 447 ntBASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 U4.1-201ENST00000620349 87 ntBASIC-2.66□□□□□ -2.84
LINC00643Q86TS7 SNORD116.1-201ENST00000365628 92 ntBASIC-2.67□□□□□ -2.84
LINC00643Q86TS7 SNORA18-201ENST00000384416 132 ntBASIC-2.67□□□□□ -2.84
LINC00643Q86TS7 MIR1-2-201ENST00000384961 85 ntBASIC-2.67□□□□□ -2.84
LINC00643Q86TS7 RNU4-61P-201ENST00000411243 107 ntBASIC-2.67□□□□□ -2.84
LINC00643Q86TS7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-2.67□□□□□ -2.84
LINC00643Q86TS7 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 MIR124-2-201ENST00000385081 109 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 RNU6-1086P-201ENST00000410930 100 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 RNU2-14P-201ENST00000411053 191 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 MTND3P23-201ENST00000431980 347 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 MTND3P1-201ENST00000441336 220 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 RNU7-175P-201ENST00000515915 61 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 SNORD36C-201ENST00000516733 66 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 MIR6818-201ENST00000621576 65 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 AC009878.1-201ENST00000621819 340 ntBASIC-2.68□□□□□ -2.84
LINC00643Q86TS7 RNU6-226P-201ENST00000363778 107 ntBASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 Y_RNA.390-201ENST00000383932 102 ntBASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 RNU6-592P-201ENST00000411333 103 ntBASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 MTCO2P16-201ENST00000436962 677 ntBASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 MTCO2P30-201ENST00000503662 364 ntBASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 RNA5SP180-201ENST00000516181 101 ntBASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 MIR6086-201ENST00000638065 55 ntBASIC-2.69□□□□□ -2.84
LINC00643Q86TS7 MIR302B-201ENST00000362188 73 ntBASIC-2.7□□□□□ -2.84
LINC00643Q86TS7 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.7□□□□□ -2.84
LINC00643Q86TS7 SNORD116-12-201ENST00000384468 92 ntBASIC-2.7□□□□□ -2.84
LINC00643Q86TS7 AC245505.1-201ENST00000556398 224 ntBASIC-2.7□□□□□ -2.84
LINC00643Q86TS7 AC008536.2-201ENST00000607284 349 ntBASIC-2.7□□□□□ -2.84
LINC00643Q86TS7 AC087683.2-201ENST00000611384 326 ntBASIC-2.7□□□□□ -2.84
LINC00643Q86TS7 AL512427.1-201ENST00000618593 349 ntBASIC-2.7□□□□□ -2.84
LINC00643Q86TS7 MIR342-201ENST00000362212 99 ntBASIC-2.71□□□□□ -2.84
LINC00643Q86TS7 SNORD11-201ENST00000459124 84 ntBASIC-2.71□□□□□ -2.84
LINC00643Q86TS7 AC099654.13-201ENST00000639774 207 ntBASIC-2.71□□□□□ -2.84
LINC00643Q86TS7 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 RNU6-108P-201ENST00000365558 107 ntBASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 MIR1278-201ENST00000408753 81 ntBASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 RN7SKP299-201ENST00000606679 301 ntBASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 AC122108.2-201ENST00000611946 526 ntBASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 AL138960.2-201ENST00000625145 535 ntBASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 MIR1246-201ENST00000636535 73 ntBASIC-2.72□□□□□ -2.84
LINC00643Q86TS7 RNY1P16-201ENST00000363063 111 ntBASIC-2.73□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.73□□□□□ -2.85
LINC00643Q86TS7 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.73□□□□□ -2.85
LINC00643Q86TS7 CYCSP46-201ENST00000423569 204 ntBASIC-2.73□□□□□ -2.85
LINC00643Q86TS7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-2.73□□□□□ -2.85
LINC00643Q86TS7 AP003357.1-201ENST00000604497 148 ntBASIC-2.73□□□□□ -2.85
LINC00643Q86TS7 AL163152.1-201ENST00000642001 374 ntBASIC-2.73□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.471-201ENST00000384312 102 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 EIF1P2-201ENST00000428233 350 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 TPTE2P5-203ENST00000458118 728 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.673-201ENST00000516306 88 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 AC127455.1-201ENST00000565496 145 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 AL357078.3-201ENST00000607528 618 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 AC006566.1-201ENST00000608943 513 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 MIR6502-201ENST00000617296 76 ntBASIC-2.74□□□□□ -2.85
LINC00643Q86TS7 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 RNU6-214P-201ENST00000384130 107 ntBASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 RNU6-790P-201ENST00000384479 105 ntBASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 RNU6-429P-201ENST00000384582 108 ntBASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 MIR7-2-201ENST00000384970 110 ntBASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 AC007012.1-201ENST00000567192 175 ntBASIC-2.75□□□□□ -2.85
LINC00643Q86TS7 RNU5F-6P-201ENST00000362979 116 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.142-201ENST00000363491 102 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 RNU6-660P-201ENST00000364566 109 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 RNU4-20P-201ENST00000365601 151 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.405-201ENST00000383979 100 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.451-201ENST00000384200 100 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.524-201ENST00000384564 100 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.561-201ENST00000384694 100 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 MTND3P21-201ENST00000433774 331 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 SNORA40.9-201ENST00000515895 93 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 RNU7-79P-201ENST00000516082 62 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.76□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 345.2 ms