Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIR570-201ENST00000384917 97 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 MIR1302-7-201ENST00000408841 72 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 AC107297.1-201ENST00000459991 176 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 RNU6-693P-201ENST00000516134 107 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.668-201ENST00000516233 93 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 RNA5SP153-201ENST00000516498 76 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 RNU6-504P-201ENST00000516568 104 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-34-201ENST00000362441 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-12-201ENST00000362583 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-29-201ENST00000362834 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-9-201ENST00000362912 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-21-201ENST00000362963 81 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 RNU6-888P-201ENST00000363010 101 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-14-201ENST00000363090 81 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-13-201ENST00000363358 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-41-201ENST00000363608 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-11-201ENST00000363616 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-5-201ENST00000363633 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-39-201ENST00000363694 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-4-201ENST00000363810 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-16-201ENST00000363887 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-6-201ENST00000363942 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-42-201ENST00000364273 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.262-201ENST00000364641 102 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-15-201ENST00000364809 81 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-1-201ENST00000364961 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-26-201ENST00000365067 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-10-201ENST00000365073 81 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-43-201ENST00000365503 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-36-201ENST00000365629 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 RNU6-484P-201ENST00000384016 107 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 MIR518F-201ENST00000384973 87 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 RNU6-381P-201ENST00000391259 108 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 AL078595.1-201ENST00000404458 226 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 SNORD115-40-201ENST00000606510 82 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 AC243994.1-201ENST00000618627 109 ntBASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.95□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.4-201ENST00000362333 112 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.76-201ENST00000362931 109 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.292-201ENST00000364904 97 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 RNU4-17P-201ENST00000365598 141 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 SNORA24-201ENST00000384096 131 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 SNORD61-201ENST00000384252 73 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 MIR548A2-201ENST00000384956 97 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 MT-TT-201ENST00000387460 66 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 AL606845.1-201ENST00000404881 255 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 AC011921.3-201ENST00000605540 361 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 MTND1P7-201ENST00000632801 297 ntBASIC0.94□□□□□ -2.26
NUP54Q7Z3B4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.37-201ENST00000362606 108 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 SNORA40.5-201ENST00000391061 128 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 RNU2-70P-201ENST00000410718 179 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 MTND3P2-201ENST00000438452 342 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 SNRPGP8-201ENST00000454064 226 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 RNU6-453P-201ENST00000516819 85 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 AC097639.2-201ENST00000603159 172 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 AC099654.10-201ENST00000640395 161 ntBASIC0.93□□□□□ -2.26
NUP54Q7Z3B4 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 SNORD58.1-201ENST00000391313 66 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 RNU6-613P-201ENST00000410412 108 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 RNU6-938P-201ENST00000411285 103 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 AL118496.2-201ENST00000448300 230 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 MIR2115-201ENST00000516657 100 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 RNU6-1270P-201ENST00000517128 108 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 MIR548AO-201ENST00000579992 96 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 AC131055.1-201ENST00000584626 316 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 AC134878.1-201ENST00000619901 243 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 U4.1-201ENST00000620349 87 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 MIR6516-201ENST00000630554 81 ntBASIC0.92□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.20-201ENST00000362479 113 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 RNU6-103P-201ENST00000363686 107 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.164-201ENST00000363709 102 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 SNORD45.3-201ENST00000363836 72 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 RNU6-396P-201ENST00000365369 105 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.478-201ENST00000384358 107 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 Y_RNA.622-201ENST00000411091 108 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
NUP54Q7Z3B4 snoU13.16-201ENST00000459350 104 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms