Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.83-201ENST00000363005 113 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA25.9-201ENST00000365087 128 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.476-201ENST00000384347 108 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.571-201ENST00000384753 98 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 MIR518F-201ENST00000384973 87 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 MIR1287-201ENST00000408492 90 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 MIR548O-201ENST00000408583 114 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 MIR1276-201ENST00000408707 83 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA31.2-201ENST00000516019 134 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA74.3-201ENST00000517108 154 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA70.22-201ENST00000517160 124 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 AL391903.3-201ENST00000612158 163 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 AC141273.2-201ENST00000618989 130 ntBASIC1.08□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.7-201ENST00000362352 102 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.23-201ENST00000362496 106 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-938P-201ENST00000411285 103 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-138P-201ENST00000515952 107 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 AC109810.1-201ENST00000534066 224 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 MIR4744-201ENST00000581563 82 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 U6.106-201ENST00000636360 105 ntBASIC1.07□□□□□ -2.24
CDHR3Q6ZTQ4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.297-201ENST00000364950 91 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 SNORD38C-201ENST00000384381 69 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-578P-201ENST00000390980 103 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 U8.17-201ENST00000391292 132 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 AC023449.1-201ENST00000454464 154 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-693P-201ENST00000516134 107 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-830P-201ENST00000516353 107 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 SNORD111.1-201ENST00000516421 86 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 AC090425.1-201ENST00000610007 140 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 MIR376A2-201ENST00000636782 80 ntBASIC1.06□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA25.3-201ENST00000363205 127 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA1-201ENST00000384107 130 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-910P-201ENST00000390844 107 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 MIR4764-201ENST00000580680 88 ntBASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
CDHR3Q6ZTQ4 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.257-201ENST00000364596 102 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 RNY3P5-201ENST00000384127 102 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.552-201ENST00000384665 112 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 MIR520C-201ENST00000385005 87 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 MIR15B-201ENST00000385045 98 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 RNU2-70P-201ENST00000410718 179 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 AF228730.3-201ENST00000436691 102 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 AL121914.1-201ENST00000450188 156 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 RPL39P39-201ENST00000455840 151 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.797-201ENST00000515977 94 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 SNORD36C-201ENST00000516733 66 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 AC097639.2-201ENST00000603159 172 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
CDHR3Q6ZTQ4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-888P-201ENST00000363010 101 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-103P-201ENST00000363686 107 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-200P-201ENST00000364743 107 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU4-70P-201ENST00000384579 139 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU2-55P-201ENST00000411146 174 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.644-201ENST00000459006 113 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 Y_RNA.674-201ENST00000516362 113 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-197P-201ENST00000516680 100 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-365P-201ENST00000517113 106 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 MIR4662B-201ENST00000579498 81 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 AL357312.1-201ENST00000603879 298 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 MIR6504-201ENST00000613520 61 ntBASIC1.03□□□□□ -2.24
CDHR3Q6ZTQ4 RNU6-1020P-201ENST00000363684 107 ntBASIC1.02□□□□□ -2.25
CDHR3Q6ZTQ4 RNU6-728P-201ENST00000365375 104 ntBASIC1.02□□□□□ -2.25
CDHR3Q6ZTQ4 SNORD24-201ENST00000383884 75 ntBASIC1.02□□□□□ -2.25
CDHR3Q6ZTQ4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.02□□□□□ -2.25
CDHR3Q6ZTQ4 MIR1302-7-201ENST00000408841 72 ntBASIC1.02□□□□□ -2.25
CDHR3Q6ZTQ4 RPS26P48-201ENST00000491713 339 ntBASIC1.02□□□□□ -2.25
CDHR3Q6ZTQ4 RNA5SP153-201ENST00000516498 76 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms