Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 SNORD115-43-201ENST00000365503 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-36-201ENST00000365629 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 RNU6-735P-201ENST00000410612 107 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 AC079804.2-201ENST00000490376 200 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 RPS26P48-201ENST00000491713 339 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD36C-201ENST00000516733 66 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-40-201ENST00000606510 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
RUFY4Q6ZNE9 RNU6-235P-201ENST00000362644 107 ntBASIC2.36□□□□□ -2.03
RUFY4Q6ZNE9 SNORA18.7-201ENST00000516910 131 ntBASIC2.36□□□□□ -2.03
RUFY4Q6ZNE9 RNU7-70P-201ENST00000516941 66 ntBASIC2.36□□□□□ -2.03
RUFY4Q6ZNE9 MIR4778-201ENST00000577635 80 ntBASIC2.36□□□□□ -2.03
RUFY4Q6ZNE9 U6.95-201ENST00000636931 70 ntBASIC2.36□□□□□ -2.03
RUFY4Q6ZNE9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
RUFY4Q6ZNE9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.35□□□□□ -2.03
RUFY4Q6ZNE9 HMGN2P23-201ENST00000456759 269 ntBASIC2.35□□□□□ -2.03
RUFY4Q6ZNE9 RNU7-107P-201ENST00000459121 61 ntBASIC2.35□□□□□ -2.03
RUFY4Q6ZNE9 AC107297.1-201ENST00000459991 176 ntBASIC2.35□□□□□ -2.03
RUFY4Q6ZNE9 MIR3914-2-201ENST00000637339 95 ntBASIC2.35□□□□□ -2.03
RUFY4Q6ZNE9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RUFY4Q6ZNE9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.34□□□□□ -2.03
RUFY4Q6ZNE9 U8.17-201ENST00000391292 132 ntBASIC2.34□□□□□ -2.03
RUFY4Q6ZNE9 RNA5SP57-201ENST00000459463 123 ntBASIC2.34□□□□□ -2.03
RUFY4Q6ZNE9 RNU6-772P-201ENST00000516042 105 ntBASIC2.34□□□□□ -2.03
RUFY4Q6ZNE9 AC133485.4-201ENST00000561835 220 ntBASIC2.34□□□□□ -2.03
RUFY4Q6ZNE9 AC138907.4-201ENST00000570107 226 ntBASIC2.34□□□□□ -2.03
RUFY4Q6ZNE9 SNORA27-201ENST00000384323 126 ntBASIC2.33□□□□□ -2.04
RUFY4Q6ZNE9 MIR1267-201ENST00000408723 78 ntBASIC2.33□□□□□ -2.04
RUFY4Q6ZNE9 RNU5E-3P-201ENST00000515913 68 ntBASIC2.33□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
RUFY4Q6ZNE9 AL773524.1-201ENST00000614065 229 ntBASIC2.33□□□□□ -2.04
RUFY4Q6ZNE9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.33□□□□□ -2.04
RUFY4Q6ZNE9 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 RNU1-133P-201ENST00000364867 167 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.351-201ENST00000365436 96 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 MIR194-1-201ENST00000384892 85 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 RNU7-96P-201ENST00000459535 64 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 RN7SKP19-201ENST00000516016 252 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-661P-201ENST00000362409 107 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-508P-201ENST00000363231 103 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 SNORD58C-201ENST00000365223 64 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.353-201ENST00000365440 108 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 SNORA70.7-201ENST00000384159 133 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 SNORA26.9-201ENST00000391322 122 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 AC019129.1-201ENST00000403786 261 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 AC244636.1-201ENST00000421152 228 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 AC093850.1-201ENST00000454121 251 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 RNU1-40P-201ENST00000516816 164 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 RNU1-97P-201ENST00000516872 164 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 AC022254.1-201ENST00000567857 235 ntBASIC2.31□□□□□ -2.04
RUFY4Q6ZNE9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-414P-201ENST00000363705 104 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.346-201ENST00000365385 112 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-1056P-201ENST00000383996 107 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNU4-52P-201ENST00000384209 138 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 MIRLET7F2-201ENST00000385277 83 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNA5SP136-201ENST00000410906 107 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNA5SP247-201ENST00000411181 105 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 AC004965.1-201ENST00000413033 213 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-717P-201ENST00000459076 104 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-1061P-201ENST00000516530 99 ntBASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.3□□□□□ -2.04
RUFY4Q6ZNE9 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 RNY1P6-201ENST00000384193 109 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 MIR516B2-201ENST00000385190 85 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 U8.13-201ENST00000390842 128 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 AL161935.2-201ENST00000414627 60 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 JTBP1-201ENST00000441314 247 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 AC025033.1-201ENST00000463883 194 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 RPS29P24-201ENST00000486345 171 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-998P-201ENST00000515894 101 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 AC090821.2-201ENST00000523552 176 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
RUFY4Q6ZNE9 RNU6-349P-201ENST00000362402 107 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 MIR526A1-201ENST00000384897 85 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 AL035398.1-201ENST00000430869 322 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 RNU7-181P-201ENST00000517234 74 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 MIR4713-201ENST00000582691 75 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 AC091932.4-201ENST00000623386 200 ntBASIC2.28□□□□□ -2.04
RUFY4Q6ZNE9 RNA5SP138-201ENST00000365098 114 ntBASIC2.27□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-203P-201ENST00000384038 104 ntBASIC2.27□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-1064P-201ENST00000410626 104 ntBASIC2.27□□□□□ -2.05
RUFY4Q6ZNE9 AC108081.1-201ENST00000604358 221 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms