Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR4712-201ENST00000583750 82 ntBASIC3.43□□□□□ -1.86
RC3H1Q5TC82 AC103810.6-201ENST00000606708 136 ntBASIC3.43□□□□□ -1.86
RC3H1Q5TC82 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.43□□□□□ -1.86
RC3H1Q5TC82 SNORA22.1-201ENST00000362701 134 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 Y_RNA.247-201ENST00000364500 92 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 RNU6-1163P-201ENST00000364516 107 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 RNU6-424P-201ENST00000384367 105 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 MIR1267-201ENST00000408723 78 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 RN7SKP123-201ENST00000410732 291 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 RPS12P2-201ENST00000439728 269 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 snoU13.26-201ENST00000459452 105 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 MIR6841-201ENST00000637129 72 ntBASIC3.42□□□□□ -1.86
RC3H1Q5TC82 AL442644.1-201ENST00000454390 3105 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RC3H1Q5TC82 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 RNU6-1229P-201ENST00000364295 107 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 RNU6-163P-201ENST00000384396 106 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 MIR592-201ENST00000384959 97 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 AC245047.3-201ENST00000429428 127 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 UBL5P1-201ENST00000507979 193 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 RNU7-181P-201ENST00000517234 74 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 RNU6-1116P-201ENST00000517269 99 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 MIR7843-201ENST00000622274 79 ntBASIC3.41□□□□□ -1.86
RC3H1Q5TC82 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RC3H1Q5TC82 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RC3H1Q5TC82 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.86
RC3H1Q5TC82 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RC3H1Q5TC82 Y_RNA.140-201ENST00000363474 103 ntBASIC3.4□□□□□ -1.87
RC3H1Q5TC82 MIR504-201ENST00000385065 83 ntBASIC3.4□□□□□ -1.87
RC3H1Q5TC82 AC015922.2-201ENST00000435593 184 ntBASIC3.4□□□□□ -1.87
RC3H1Q5TC82 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.4□□□□□ -1.87
RC3H1Q5TC82 AL606517.2-201ENST00000442855 241 ntBASIC3.4□□□□□ -1.87
RC3H1Q5TC82 RNU6-667P-201ENST00000517186 102 ntBASIC3.4□□□□□ -1.87
RC3H1Q5TC82 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.4□□□□□ -1.87
RC3H1Q5TC82 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RC3H1Q5TC82 RNU6-862P-201ENST00000362804 105 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 U8.2-201ENST00000363156 134 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 SNORD21-201ENST00000383953 95 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 MIR561-201ENST00000385216 97 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 RN7SKP192-201ENST00000411291 327 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 Z96811.1-201ENST00000445880 108 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 UQCRHP3-201ENST00000451503 251 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 AC003982.1-202ENST00000469928 248 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.39□□□□□ -1.87
RC3H1Q5TC82 MIR4506-201ENST00000584693 77 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 AC145423.2-201ENST00000610631 239 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 AC027279.3-201ENST00000625055 122 ntBASIC3.39□□□□□ -1.87
RC3H1Q5TC82 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RC3H1Q5TC82 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RC3H1Q5TC82 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RC3H1Q5TC82 Y_RNA.99-201ENST00000363138 105 ntBASIC3.38□□□□□ -1.87
RC3H1Q5TC82 SNORD115-27-201ENST00000364430 82 ntBASIC3.38□□□□□ -1.87
RC3H1Q5TC82 RNU6-524P-201ENST00000384270 107 ntBASIC3.38□□□□□ -1.87
RC3H1Q5TC82 RNU7-34P-201ENST00000459394 64 ntBASIC3.38□□□□□ -1.87
RC3H1Q5TC82 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.38□□□□□ -1.87
RC3H1Q5TC82 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.38□□□□□ -1.87
RC3H1Q5TC82 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RC3H1Q5TC82 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 MIRLET7C-201ENST00000362160 84 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 SNORD38.1-201ENST00000363863 68 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 RNU6-457P-201ENST00000363999 107 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 SNORD56.5-201ENST00000364281 72 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 SNORA32-201ENST00000384072 121 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 SNORA26.7-201ENST00000391288 122 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 RNA5SP261-201ENST00000410536 106 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 AL445685.2-201ENST00000422551 342 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 AC018868.1-201ENST00000491307 315 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 AC093729.1-201ENST00000513074 128 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 AL355297.2-201ENST00000604792 129 ntBASIC3.37□□□□□ -1.87
RC3H1Q5TC82 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RC3H1Q5TC82 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RC3H1Q5TC82 RNA5SP289-201ENST00000362332 137 ntBASIC3.36□□□□□ -1.87
RC3H1Q5TC82 MIR27B-201ENST00000385129 97 ntBASIC3.36□□□□□ -1.87
RC3H1Q5TC82 SNORA26.6-201ENST00000391256 115 ntBASIC3.36□□□□□ -1.87
RC3H1Q5TC82 AL161932.1-201ENST00000437408 146 ntBASIC3.36□□□□□ -1.87
RC3H1Q5TC82 STAG3L5P-204ENST00000443759 179 ntBASIC3.36□□□□□ -1.87
RC3H1Q5TC82 RNU6-56P-201ENST00000516986 93 ntBASIC3.36□□□□□ -1.87
RC3H1Q5TC82 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RC3H1Q5TC82 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.36□□□□□ -1.87
RC3H1Q5TC82 Z98742.3-201ENST00000418637 326 ntBASIC3.35□□□□□ -1.87
RC3H1Q5TC82 RNU7-2P-201ENST00000516096 62 ntBASIC3.35□□□□□ -1.87
RC3H1Q5TC82 AC007536.1-201ENST00000533382 349 ntBASIC3.35□□□□□ -1.87
RC3H1Q5TC82 MIR3605-201ENST00000583214 100 ntBASIC3.35□□□□□ -1.87
RC3H1Q5TC82 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.35□□□□□ -1.87
RC3H1Q5TC82 SEPT14P17-201ENST00000617978 177 ntBASIC3.35□□□□□ -1.87
RC3H1Q5TC82 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
RC3H1Q5TC82 AC005336.3-201ENST00000623833 2679 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 SNORA1.2-201ENST00000365189 134 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 SNORA70.7-201ENST00000384159 133 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 RNU6-160P-201ENST00000384591 107 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 MIR519C-201ENST00000385053 87 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 RNA5SP109-201ENST00000391010 116 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms