Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 RNU1-17P-201ENST00000363022 152 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 RNY1P11-201ENST00000363759 113 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 Y_RNA.251-201ENST00000364551 99 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 SNORD50.2-201ENST00000365465 70 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 RNU6-1292P-201ENST00000383856 107 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 Y_RNA.488-201ENST00000384403 102 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 MIR569-201ENST00000385228 96 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 SNORD37.2-201ENST00000391075 66 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 SNORD77.3-201ENST00000391113 65 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 RNU7-197P-201ENST00000458836 62 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 AC112693.2-201ENST00000556538 232 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 MIR4778-201ENST00000577635 80 ntBASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.23□□□□□ -2.21
SNAI3Q3KNW1 SNORD33-201ENST00000362761 85 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 RNU6-199P-201ENST00000362954 107 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 RNU6-457P-201ENST00000363999 107 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 SNORD38C-201ENST00000384381 69 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 MIR452-201ENST00000385020 85 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 MIR624-201ENST00000385217 97 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 MIR613-201ENST00000385248 95 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 SNORA67.5-201ENST00000391036 107 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 AF228730.3-201ENST00000436691 102 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 AC092991.1-201ENST00000477176 376 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 MIR3129-201ENST00000581095 76 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
SNAI3Q3KNW1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 U8.1-201ENST00000362843 134 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 SNORD115-28-201ENST00000363931 81 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 RNU6-704P-201ENST00000364162 103 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.497-201ENST00000384447 98 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.568-201ENST00000384742 113 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 MIR526A1-201ENST00000384897 85 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 MIR513A1-201ENST00000385138 129 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 MIR513C-201ENST00000401352 84 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 SNORA11.2-201ENST00000408318 127 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 RNA5SP127-201ENST00000411051 133 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 RNU4-57P-201ENST00000515980 135 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 SUMO2P16-201ENST00000519475 264 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 AC134878.1-201ENST00000619901 243 ntBASIC1.21□□□□□ -2.22
SNAI3Q3KNW1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.343-201ENST00000365354 112 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 RNA5SP259-201ENST00000365541 109 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.410-201ENST00000383992 113 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 MIR136-201ENST00000385207 82 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 SNORA17.3-201ENST00000391159 129 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 RNU6-938P-201ENST00000411285 103 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 SNORA18.4-201ENST00000516440 124 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 RNU6-426P-201ENST00000516464 97 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 AC131055.1-201ENST00000584626 316 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 AC015726.2-201ENST00000620112 122 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 MIR376A2-201ENST00000636782 80 ntBASIC1.2□□□□□ -2.22
SNAI3Q3KNW1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 SNORA2.2-201ENST00000365473 135 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 MIR516B2-201ENST00000385190 85 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 MIR653-201ENST00000385279 96 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 RNU4-61P-201ENST00000411243 107 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 AC087499.4-201ENST00000448505 178 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 RNA5SP272-201ENST00000516095 111 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 SNORA25.12-201ENST00000516202 82 ntBASIC1.19□□□□□ -2.22
SNAI3Q3KNW1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.584-201ENST00000391090 114 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 RNU6-460P-201ENST00000391158 108 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 U8.17-201ENST00000391292 132 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 SNX2P2-201ENST00000424553 323 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 RNU6-917P-201ENST00000516294 104 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 SNORD36C-201ENST00000516733 66 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 CYP3A52P-201ENST00000563326 91 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 MIR3910-1-201ENST00000580936 111 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 MIR5197-201ENST00000583721 112 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 MIR7843-201ENST00000622274 79 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 AP001340.1-201ENST00000624405 217 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 AC010332.2-201ENST00000613083 1904 ntBASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.52-201ENST00000362760 96 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 RNU6-1189P-201ENST00000383958 107 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 Y_RNA.420-201ENST00000384043 110 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 RNU6-257P-201ENST00000410238 98 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 snoU13.23-201ENST00000458863 104 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 SCARNA15-202ENST00000516881 127 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 RNU2-60P-201ENST00000517290 128 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.17□□□□□ -2.22
SNAI3Q3KNW1 AP003484.1-201ENST00000530974 250 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms