Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LTBQ06643 SNORD77.3-201ENST00000391113 65 ntBASIC1.66□□□□□ -2.14
LTBQ06643 MIR891A-201ENST00000401237 79 ntBASIC1.66□□□□□ -2.14
LTBQ06643 MIR1276-201ENST00000408707 83 ntBASIC1.66□□□□□ -2.14
LTBQ06643 RNA5SP127-201ENST00000411051 133 ntBASIC1.66□□□□□ -2.14
LTBQ06643 AF228730.3-201ENST00000436691 102 ntBASIC1.66□□□□□ -2.14
LTBQ06643 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
LTBQ06643 RNU7-107P-201ENST00000459121 61 ntBASIC1.66□□□□□ -2.14
LTBQ06643 AC114811.1-201ENST00000507207 168 ntBASIC1.66□□□□□ -2.14
LTBQ06643 RNU4-57P-201ENST00000515980 135 ntBASIC1.66□□□□□ -2.14
LTBQ06643 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
LTBQ06643 MIR4287-201ENST00000579398 78 ntBASIC1.66□□□□□ -2.14
LTBQ06643 AC006441.5-201ENST00000612680 209 ntBASIC1.66□□□□□ -2.14
LTBQ06643 MIR6734-201ENST00000621166 68 ntBASIC1.66□□□□□ -2.14
LTBQ06643 MIR376A2-201ENST00000636782 80 ntBASIC1.66□□□□□ -2.14
LTBQ06643 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.65□□□□□ -2.14
LTBQ06643 RNU6-112P-201ENST00000363599 104 ntBASIC1.65□□□□□ -2.15
LTBQ06643 snoU2-30.1-201ENST00000365012 70 ntBASIC1.65□□□□□ -2.15
LTBQ06643 RNU6-1292P-201ENST00000383856 107 ntBASIC1.65□□□□□ -2.15
LTBQ06643 RNU6-442P-201ENST00000383968 104 ntBASIC1.65□□□□□ -2.15
LTBQ06643 U8.16-201ENST00000391279 133 ntBASIC1.65□□□□□ -2.15
LTBQ06643 RNU6-735P-201ENST00000410612 107 ntBASIC1.65□□□□□ -2.15
LTBQ06643 CALM2P4-201ENST00000430810 426 ntBASIC1.65□□□□□ -2.15
LTBQ06643 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.65□□□□□ -2.15
LTBQ06643 RNU7-25P-201ENST00000516544 62 ntBASIC1.65□□□□□ -2.15
LTBQ06643 MIR3121-201ENST00000579680 77 ntBASIC1.65□□□□□ -2.15
LTBQ06643 MIR3683-201ENST00000580847 82 ntBASIC1.65□□□□□ -2.15
LTBQ06643 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
LTBQ06643 AC131280.1-202ENST00000624067 4211 ntBASIC1.64□□□□□ -2.15
LTBQ06643 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
LTBQ06643 RNA5SP205-201ENST00000364653 136 ntBASIC1.64□□□□□ -2.15
LTBQ06643 Y_RNA.547-201ENST00000384654 119 ntBASIC1.64□□□□□ -2.15
LTBQ06643 MIR802-201ENST00000390235 94 ntBASIC1.64□□□□□ -2.15
LTBQ06643 AL603914.1-201ENST00000401964 204 ntBASIC1.64□□□□□ -2.15
LTBQ06643 MIR548O-201ENST00000408583 114 ntBASIC1.64□□□□□ -2.15
LTBQ06643 AC069257.2-201ENST00000441819 155 ntBASIC1.64□□□□□ -2.15
LTBQ06643 RNA5SP220-201ENST00000516298 104 ntBASIC1.64□□□□□ -2.15
LTBQ06643 RNU6-659P-201ENST00000516454 104 ntBASIC1.64□□□□□ -2.15
LTBQ06643 Y_RNA.690-201ENST00000516603 95 ntBASIC1.64□□□□□ -2.15
LTBQ06643 Y_RNA.692-201ENST00000516627 105 ntBASIC1.64□□□□□ -2.15
LTBQ06643 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
LTBQ06643 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
LTBQ06643 U1.36-201ENST00000620684 176 ntBASIC1.64□□□□□ -2.15
LTBQ06643 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LTBQ06643 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
LTBQ06643 Y_RNA.114-201ENST00000363265 113 ntBASIC1.63□□□□□ -2.15
LTBQ06643 Y_RNA.191-201ENST00000363972 113 ntBASIC1.63□□□□□ -2.15
LTBQ06643 Y_RNA.242-201ENST00000364473 110 ntBASIC1.63□□□□□ -2.15
LTBQ06643 Y_RNA.280-201ENST00000364765 112 ntBASIC1.63□□□□□ -2.15
LTBQ06643 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
LTBQ06643 Y_RNA.336-201ENST00000365307 109 ntBASIC1.63□□□□□ -2.15
LTBQ06643 RNU6-1031P-201ENST00000384773 107 ntBASIC1.63□□□□□ -2.15
LTBQ06643 MIR520A-201ENST00000384862 85 ntBASIC1.63□□□□□ -2.15
LTBQ06643 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
LTBQ06643 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LTBQ06643 RN7SKP200-201ENST00000410564 320 ntBASIC1.63□□□□□ -2.15
LTBQ06643 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.63□□□□□ -2.15
LTBQ06643 Y_RNA.651-201ENST00000459380 103 ntBASIC1.63□□□□□ -2.15
LTBQ06643 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.63□□□□□ -2.15
LTBQ06643 RNA5SP168-201ENST00000516642 112 ntBASIC1.63□□□□□ -2.15
LTBQ06643 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.63□□□□□ -2.15
LTBQ06643 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.63□□□□□ -2.15
LTBQ06643 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
LTBQ06643 SNORA28-201ENST00000606769 126 ntBASIC1.63□□□□□ -2.15
LTBQ06643 AL773524.1-201ENST00000614065 229 ntBASIC1.63□□□□□ -2.15
LTBQ06643 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
LTBQ06643 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.63□□□□□ -2.15
LTBQ06643 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.62□□□□□ -2.15
LTBQ06643 SNORD18B-201ENST00000365659 72 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNU6-163P-201ENST00000384396 106 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNA5SP212-201ENST00000391223 107 ntBASIC1.62□□□□□ -2.15
LTBQ06643 AL034345.1-201ENST00000407768 123 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNU2-7P-201ENST00000410794 178 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNA5SP100-201ENST00000410903 110 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNA5SP59-201ENST00000410922 110 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNU6-938P-201ENST00000411285 103 ntBASIC1.62□□□□□ -2.15
LTBQ06643 AC244636.1-201ENST00000421152 228 ntBASIC1.62□□□□□ -2.15
LTBQ06643 AL158147.1-201ENST00000443970 75 ntBASIC1.62□□□□□ -2.15
LTBQ06643 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.62□□□□□ -2.15
LTBQ06643 RNU5E-3P-201ENST00000515913 68 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNA5SP236-201ENST00000516169 116 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
LTBQ06643 RNU6-1149P-201ENST00000516810 97 ntBASIC1.62□□□□□ -2.15
LTBQ06643 SCARNA15-202ENST00000516881 127 ntBASIC1.62□□□□□ -2.15
LTBQ06643 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.62□□□□□ -2.15
LTBQ06643 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.62□□□□□ -2.15
LTBQ06643 MIR4299-201ENST00000577899 72 ntBASIC1.62□□□□□ -2.15
LTBQ06643 Y_RNA.757-201ENST00000578934 114 ntBASIC1.62□□□□□ -2.15
LTBQ06643 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.62□□□□□ -2.15
LTBQ06643 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
LTBQ06643 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.62□□□□□ -2.15
LTBQ06643 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.62□□□□□ -2.15
LTBQ06643 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
LTBQ06643 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LTBQ06643 RNA5SP276-201ENST00000362580 94 ntBASIC1.61□□□□□ -2.15
LTBQ06643 Y_RNA.327-201ENST00000365201 102 ntBASIC1.61□□□□□ -2.15
LTBQ06643 RNU6-424P-201ENST00000384367 105 ntBASIC1.61□□□□□ -2.15
LTBQ06643 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
LTBQ06643 AL627390.1-201ENST00000396055 340 ntBASIC1.61□□□□□ -2.15
LTBQ06643 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms