Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL162376.1-201ENST00000624117 175 ntBASIC-0.7□□□□□ -2.52
CCL20P78556 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.71□□□□□ -2.52
CCL20P78556 RNY1P4-201ENST00000384595 115 ntBASIC-0.71□□□□□ -2.52
CCL20P78556 RPS3AP52-201ENST00000435639 297 ntBASIC-0.71□□□□□ -2.52
CCL20P78556 RNU6-998P-201ENST00000515894 101 ntBASIC-0.71□□□□□ -2.52
CCL20P78556 RN7SKP299-201ENST00000606679 301 ntBASIC-0.71□□□□□ -2.52
CCL20P78556 Z99129.1-201ENST00000612510 255 ntBASIC-0.71□□□□□ -2.52
CCL20P78556 AL596211.1-201ENST00000569873 2277 ntBASIC-0.71□□□□□ -2.52
CCL20P78556 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 RNU6-653P-201ENST00000363074 106 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 SNORD114-28-201ENST00000363610 72 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 MIR196A2-201ENST00000385189 110 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 AC096949.1-201ENST00000412047 152 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 SNORA25.16-201ENST00000516741 121 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 IGLVI-20-201ENST00000519296 130 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 AC141846.1-201ENST00000568348 142 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 MIR1273G-201ENST00000577677 100 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 MIR8064-201ENST00000612863 90 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 PISRT1.1-201ENST00000616930 107 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 FTX_2.1-201ENST00000618816 94 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 MIR6717-201ENST00000622747 73 ntBASIC-0.72□□□□□ -2.52
CCL20P78556 RNA5SP245-201ENST00000364239 121 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 RNU6-597P-201ENST00000365620 102 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 SNORA72.4-201ENST00000384174 132 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 RNU2-14P-201ENST00000411053 191 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 AC108059.2-201ENST00000434626 151 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 AC109327.2-201ENST00000448339 378 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 RNU6-693P-201ENST00000516134 107 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 MIR3145-201ENST00000580727 82 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 MIR2909-201ENST00000617113 69 ntBASIC-0.73□□□□□ -2.53
CCL20P78556 SNORD81.1-201ENST00000363064 77 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 SNORD115-24-201ENST00000363528 82 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 SNORA26.6-201ENST00000391256 115 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 MIR548F5-201ENST00000408421 86 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 RNU6-284P-201ENST00000411105 106 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 RNU2-31P-201ENST00000516954 155 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 AC109635.3-201ENST00000529536 185 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.74□□□□□ -2.53
CCL20P78556 MIR548AZ-201ENST00000616567 95 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.74□□□□□ -2.53
CCL20P78556 MIR342-201ENST00000362212 99 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 SNORA63.5-201ENST00000363548 123 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 MIR548K-201ENST00000408406 116 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 RNA5SP261-201ENST00000410536 106 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 RNU7-169P-201ENST00000459456 61 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 AL049861.1-201ENST00000603130 150 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 uc_338.28-201ENST00000612082 187 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 AC084368.1-201ENST00000620935 65 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 TPTEP1-208ENST00000636884 213 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 AC073869.9-201ENST00000641610 120 ntBASIC-0.75□□□□□ -2.53
CCL20P78556 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 RNU6-949P-201ENST00000384040 107 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 RNU6-811P-201ENST00000384069 107 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 MIR548A2-201ENST00000384956 97 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 MIR876-201ENST00000401147 81 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 MTATP6P26-201ENST00000445926 662 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 RNU7-45P-201ENST00000459460 63 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 AC144568.1-201ENST00000520139 137 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 AC015540.1-201ENST00000615828 501 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 U6.92-201ENST00000636464 89 ntBASIC-0.76□□□□□ -2.53
CCL20P78556 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.77□□□□□ -2.53
CCL20P78556 MIR302B-201ENST00000362188 73 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 SNORD114-31-201ENST00000363219 75 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 SNORA1-201ENST00000384107 130 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 SNORA32.3-201ENST00000384772 121 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 AC244250.2-201ENST00000418731 148 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 MTATP6P17-201ENST00000431030 672 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 MTND1P1-201ENST00000445453 368 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 RNU7-4P-201ENST00000516961 62 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 MIR4423-201ENST00000580922 80 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 AC011712.1-201ENST00000588959 234 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 uc_338.36-201ENST00000622331 158 ntBASIC-0.77□□□□□ -2.53
CCL20P78556 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.78□□□□□ -2.53
CCL20P78556 RNY3P11-201ENST00000364153 102 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 RNY1-201ENST00000364228 113 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 MIR518E-201ENST00000385252 88 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 AC114755.3-201ENST00000481111 251 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 MIR4662B-201ENST00000579498 81 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 MIR3908-201ENST00000579798 126 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 AL021707.8-201ENST00000609428 183 ntBASIC-0.78□□□□□ -2.53
CCL20P78556 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.79□□□□□ -2.54
CCL20P78556 SNORD114-11-201ENST00000363738 75 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms