Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
IRX4P78413 Y_RNA.262-201ENST00000364641 102 ntBASIC1.11□□□□□ -2.23
IRX4P78413 SNORA20.1-201ENST00000364790 130 ntBASIC1.11□□□□□ -2.23
IRX4P78413 RNU6-1138P-201ENST00000365359 106 ntBASIC1.11□□□□□ -2.23
IRX4P78413 MT-TT-201ENST00000387460 66 ntBASIC1.11□□□□□ -2.23
IRX4P78413 AC048334.1-201ENST00000477975 159 ntBASIC1.11□□□□□ -2.23
IRX4P78413 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
IRX4P78413 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
IRX4P78413 Pinc.1-201ENST00000616452 154 ntBASIC1.11□□□□□ -2.23
IRX4P78413 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
IRX4P78413 Y_RNA.308-201ENST00000365043 101 ntBASIC1.1□□□□□ -2.23
IRX4P78413 RNU6-381P-201ENST00000391259 108 ntBASIC1.1□□□□□ -2.23
IRX4P78413 RPL39P39-201ENST00000455840 151 ntBASIC1.1□□□□□ -2.23
IRX4P78413 SNORD123-201ENST00000459473 70 ntBASIC1.1□□□□□ -2.23
IRX4P78413 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
IRX4P78413 RN7SKP164-201ENST00000516138 266 ntBASIC1.1□□□□□ -2.23
IRX4P78413 RNY3P16-201ENST00000516338 101 ntBASIC1.1□□□□□ -2.23
IRX4P78413 RNU6-453P-201ENST00000516819 85 ntBASIC1.1□□□□□ -2.23
IRX4P78413 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
IRX4P78413 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
IRX4P78413 AC006441.5-201ENST00000612680 209 ntBASIC1.1□□□□□ -2.23
IRX4P78413 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
IRX4P78413 MIR616-201ENST00000385293 97 ntBASIC1.09□□□□□ -2.23
IRX4P78413 MIR548O-201ENST00000408583 114 ntBASIC1.09□□□□□ -2.23
IRX4P78413 Y_RNA.622-201ENST00000411091 108 ntBASIC1.09□□□□□ -2.23
IRX4P78413 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.09□□□□□ -2.23
IRX4P78413 SCARNA8-201ENST00000515924 131 ntBASIC1.09□□□□□ -2.23
IRX4P78413 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
IRX4P78413 RNU7-25P-201ENST00000516544 62 ntBASIC1.09□□□□□ -2.23
IRX4P78413 RNU6-111P-201ENST00000517179 105 ntBASIC1.09□□□□□ -2.23
IRX4P78413 MIR4662B-201ENST00000579498 81 ntBASIC1.09□□□□□ -2.23
IRX4P78413 AL096861.1-201ENST00000610899 123 ntBASIC1.09□□□□□ -2.23
IRX4P78413 AL391903.3-201ENST00000612158 163 ntBASIC1.09□□□□□ -2.23
IRX4P78413 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
IRX4P78413 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
IRX4P78413 RNY4P28-201ENST00000365281 93 ntBASIC1.08□□□□□ -2.24
IRX4P78413 Y_RNA.486-201ENST00000384398 107 ntBASIC1.08□□□□□ -2.24
IRX4P78413 RNU6-493P-201ENST00000391321 108 ntBASIC1.08□□□□□ -2.24
IRX4P78413 AL606845.1-201ENST00000404881 255 ntBASIC1.08□□□□□ -2.24
IRX4P78413 Y_RNA.626-201ENST00000411288 95 ntBASIC1.08□□□□□ -2.24
IRX4P78413 Y_RNA.666-201ENST00000516187 112 ntBASIC1.08□□□□□ -2.24
IRX4P78413 RNU4-71P-201ENST00000516258 113 ntBASIC1.08□□□□□ -2.24
IRX4P78413 MIR5000-201ENST00000577717 103 ntBASIC1.08□□□□□ -2.24
IRX4P78413 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
IRX4P78413 RNU6-923P-201ENST00000364753 107 ntBASIC1.07□□□□□ -2.24
IRX4P78413 MIR520C-201ENST00000385005 87 ntBASIC1.07□□□□□ -2.24
IRX4P78413 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
IRX4P78413 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
IRX4P78413 SNORD28B-201ENST00000390993 75 ntBASIC1.07□□□□□ -2.24
IRX4P78413 SNORD58.1-201ENST00000391313 66 ntBASIC1.07□□□□□ -2.24
IRX4P78413 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.07□□□□□ -2.24
IRX4P78413 Y_RNA.618-201ENST00000410949 107 ntBASIC1.07□□□□□ -2.24
IRX4P78413 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.07□□□□□ -2.24
IRX4P78413 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
IRX4P78413 MIR4764-201ENST00000580680 88 ntBASIC1.07□□□□□ -2.24
IRX4P78413 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
IRX4P78413 AL442644.1-201ENST00000454390 3105 ntBASIC1.06□□□□□ -2.24
IRX4P78413 Y_RNA.199-201ENST00000364014 102 ntBASIC1.06□□□□□ -2.24
IRX4P78413 Y_RNA.401-201ENST00000383965 117 ntBASIC1.06□□□□□ -2.24
IRX4P78413 RNU6-484P-201ENST00000384016 107 ntBASIC1.06□□□□□ -2.24
IRX4P78413 Y_RNA.432-201ENST00000384087 111 ntBASIC1.06□□□□□ -2.24
IRX4P78413 Y_RNA.489-201ENST00000384410 101 ntBASIC1.06□□□□□ -2.24
IRX4P78413 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
IRX4P78413 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.06□□□□□ -2.24
IRX4P78413 RNU7-41P-201ENST00000515917 61 ntBASIC1.06□□□□□ -2.24
IRX4P78413 RNU6-1299P-201ENST00000516316 100 ntBASIC1.06□□□□□ -2.24
IRX4P78413 RNU6-830P-201ENST00000516353 107 ntBASIC1.06□□□□□ -2.24
IRX4P78413 RNU6-1271P-201ENST00000517049 105 ntBASIC1.06□□□□□ -2.24
IRX4P78413 RNU7-181P-201ENST00000517234 74 ntBASIC1.06□□□□□ -2.24
IRX4P78413 MIR3192-201ENST00000584920 77 ntBASIC1.06□□□□□ -2.24
IRX4P78413 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
IRX4P78413 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
IRX4P78413 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
IRX4P78413 Y_RNA.91-201ENST00000363042 107 ntBASIC1.05□□□□□ -2.24
IRX4P78413 SNORD45.3-201ENST00000363836 72 ntBASIC1.05□□□□□ -2.24
IRX4P78413 Y_RNA.188-201ENST00000363952 111 ntBASIC1.05□□□□□ -2.24
IRX4P78413 RNY3P5-201ENST00000384127 102 ntBASIC1.05□□□□□ -2.24
IRX4P78413 Y_RNA.547-201ENST00000384654 119 ntBASIC1.05□□□□□ -2.24
IRX4P78413 RNU6-1228P-201ENST00000391014 107 ntBASIC1.05□□□□□ -2.24
IRX4P78413 U8.17-201ENST00000391292 132 ntBASIC1.05□□□□□ -2.24
IRX4P78413 RNU2-70P-201ENST00000410718 179 ntBASIC1.05□□□□□ -2.24
IRX4P78413 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.05□□□□□ -2.24
IRX4P78413 RNU4-57P-201ENST00000515980 135 ntBASIC1.05□□□□□ -2.24
IRX4P78413 RNU6-126P-201ENST00000516685 103 ntBASIC1.05□□□□□ -2.24
IRX4P78413 RNU6-1270P-201ENST00000517128 108 ntBASIC1.05□□□□□ -2.24
IRX4P78413 RNU2-4P-201ENST00000606190 192 ntBASIC1.05□□□□□ -2.24
IRX4P78413 Y_RNA.363-201ENST00000365529 113 ntBASIC1.04□□□□□ -2.24
IRX4P78413 Y_RNA.374-201ENST00000365606 101 ntBASIC1.04□□□□□ -2.24
IRX4P78413 RNY1P4-201ENST00000384595 115 ntBASIC1.04□□□□□ -2.24
IRX4P78413 MIR570-201ENST00000384917 97 ntBASIC1.04□□□□□ -2.24
IRX4P78413 AC245047.7-201ENST00000440265 293 ntBASIC1.04□□□□□ -2.24
IRX4P78413 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.04□□□□□ -2.24
IRX4P78413 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
IRX4P78413 RNU6-365P-201ENST00000517113 106 ntBASIC1.04□□□□□ -2.24
IRX4P78413 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
IRX4P78413 MIR4308-201ENST00000580634 81 ntBASIC1.04□□□□□ -2.24
IRX4P78413 MIR548AR-201ENST00000582191 57 ntBASIC1.04□□□□□ -2.24
IRX4P78413 RN7SL793P-201ENST00000583259 296 ntBASIC1.04□□□□□ -2.24
IRX4P78413 AC008133.2-201ENST00000624540 351 ntBASIC1.04□□□□□ -2.24
IRX4P78413 RNU6-103P-201ENST00000363686 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms