Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 AC109327.2-201ENST00000448339 378 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 AC009094.1-201ENST00000564443 426 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 AL662814.1-201ENST00000617364 121 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 AC084368.1-201ENST00000620935 65 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.84□□□□□ -2.54
NUP98P52948 RNU6-332P-201ENST00000391193 108 ntBASIC-0.84□□□□□ -2.54
NUP98P52948 RNU6-648P-201ENST00000410190 107 ntBASIC-0.84□□□□□ -2.54
NUP98P52948 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.84□□□□□ -2.54
NUP98P52948 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.84□□□□□ -2.54
NUP98P52948 MTATP6P17-201ENST00000431030 672 ntBASIC-0.84□□□□□ -2.54
NUP98P52948 RNU6-470P-201ENST00000515954 104 ntBASIC-0.84□□□□□ -2.54
NUP98P52948 AP001330.5-201ENST00000607176 411 ntBASIC-0.84□□□□□ -2.54
NUP98P52948 SNORD115-28-201ENST00000363931 81 ntBASIC-0.85□□□□□ -2.54
NUP98P52948 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.85□□□□□ -2.54
NUP98P52948 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.85□□□□□ -2.54
NUP98P52948 SNORD12C-201ENST00000386307 89 ntBASIC-0.85□□□□□ -2.54
NUP98P52948 RNU6-437P-201ENST00000459408 95 ntBASIC-0.85□□□□□ -2.54
NUP98P52948 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 MIR516B1-201ENST00000385211 90 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 SNORD72-201ENST00000390994 80 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 MIR1207-201ENST00000408249 87 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 RNU7-66P-201ENST00000459469 62 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 AC024405.2-202ENST00000532731 184 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 MIR4324-201ENST00000584846 72 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.85□□□□□ -2.55
NUP98P52948 RNU6-842P-201ENST00000384269 107 ntBASIC-0.86□□□□□ -2.55
NUP98P52948 RNU6-913P-201ENST00000390913 95 ntBASIC-0.86□□□□□ -2.55
NUP98P52948 RNA5SP237-201ENST00000410414 113 ntBASIC-0.86□□□□□ -2.55
NUP98P52948 MIR378F-201ENST00000578143 78 ntBASIC-0.86□□□□□ -2.55
NUP98P52948 AC245008.1-201ENST00000608123 476 ntBASIC-0.86□□□□□ -2.55
NUP98P52948 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 MIR514A2-201ENST00000385131 88 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 MIR514A3-201ENST00000385132 88 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 FCF1P4-201ENST00000448326 183 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 MTND3P7-201ENST00000474435 343 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 RPS29P24-201ENST00000486345 171 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 AC011352.1-201ENST00000512300 793 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 SNORA70.25-201ENST00000612741 95 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 MIR8066-201ENST00000617280 78 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 AC105081.1-201ENST00000617727 106 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 AC022140.2-201ENST00000623500 188 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.87□□□□□ -2.55
NUP98P52948 USP9YP30-201ENST00000430729 455 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 MTND2P22-201ENST00000444325 1033 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 RNU6-693P-201ENST00000516134 107 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 RNU7-25P-201ENST00000516544 62 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 MIR6507-201ENST00000613630 70 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 U4.2-201ENST00000618561 85 ntBASIC-0.87□□□□□ -2.55
NUP98P52948 MIR365A-201ENST00000362260 87 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 SNORA22B-201ENST00000383876 138 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 RNU6-949P-201ENST00000384040 107 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 MTCO3P40-201ENST00000392516 676 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.88□□□□□ -2.55
NUP98P52948 MIR4306-201ENST00000583390 91 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 AC124312.5-201ENST00000604451 268 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 AC022441.3-201ENST00000605737 136 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 DISC2.1-201ENST00000612827 205 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 AC124864.2-201ENST00000624736 186 ntBASIC-0.88□□□□□ -2.55
NUP98P52948 RNU6-626P-201ENST00000363354 107 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 U8.15-201ENST00000390947 134 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 SNORD77.3-201ENST00000391113 65 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 SNORD11-201ENST00000459124 84 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 AP003072.1-201ENST00000531740 145 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 AL162413.1-201ENST00000603198 110 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 AC087752.4-201ENST00000605911 462 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 AP001282.2-201ENST00000616149 309 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 MIR6863-201ENST00000636112 90 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 RNU4-55P-201ENST00000410731 137 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 RNU7-149P-201ENST00000516739 59 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 RNU6-566P-201ENST00000516790 107 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 AC060788.1-201ENST00000521318 469 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 AC060780.3-201ENST00000589464 80 ntBASIC-0.89□□□□□ -2.55
NUP98P52948 RNU6-702P-201ENST00000364982 107 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 SNORD110-201ENST00000408189 75 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 CHEK2P4-201ENST00000450340 246 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.9□□□□□ -2.55
NUP98P52948 RNU6-881P-201ENST00000516813 102 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 RNU1-54P-201ENST00000517181 120 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 AC100767.1-201ENST00000528178 123 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 AL080274.1-201ENST00000605565 220 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 AC093726.3-201ENST00000637588 150 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 AL596211.1-201ENST00000569873 2277 ntBASIC-0.9□□□□□ -2.55
NUP98P52948 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.91□□□□□ -2.55
NUP98P52948 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.91□□□□□ -2.55
NUP98P52948 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.91□□□□□ -2.55
NUP98P52948 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.91□□□□□ -2.55
NUP98P52948 SNORD115-47-201ENST00000391226 86 ntBASIC-0.91□□□□□ -2.55
NUP98P52948 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.91□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms