Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNU7-181P-201ENST00000517234 74 ntBASIC1.34□□□□□ -2.19
CLCNKAP51800 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
CLCNKAP51800 MIR3668-201ENST00000582138 75 ntBASIC1.34□□□□□ -2.19
CLCNKAP51800 AL359821.1-201ENST00000605519 182 ntBASIC1.34□□□□□ -2.19
CLCNKAP51800 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.34□□□□□ -2.19
CLCNKAP51800 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CLCNKAP51800 RNU6-888P-201ENST00000363010 101 ntBASIC1.33□□□□□ -2.2
CLCNKAP51800 SNORD28B-201ENST00000390993 75 ntBASIC1.33□□□□□ -2.2
CLCNKAP51800 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.33□□□□□ -2.2
CLCNKAP51800 RPL30P7-201ENST00000479312 323 ntBASIC1.33□□□□□ -2.2
CLCNKAP51800 RNU6-1053P-201ENST00000515930 101 ntBASIC1.33□□□□□ -2.2
CLCNKAP51800 SNORD111.1-201ENST00000516421 86 ntBASIC1.33□□□□□ -2.2
CLCNKAP51800 SNORA74.3-201ENST00000517108 154 ntBASIC1.33□□□□□ -2.2
CLCNKAP51800 AL512310.8-201ENST00000550183 120 ntBASIC1.33□□□□□ -2.2
CLCNKAP51800 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 SNORD115-28-201ENST00000363931 81 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 Y_RNA.240-201ENST00000364469 95 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 SNORA1-201ENST00000384107 130 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 RNU6-907P-201ENST00000390924 102 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 U8.17-201ENST00000391292 132 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 RNU5E-9P-201ENST00000411164 104 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 RNU6-947P-201ENST00000516264 106 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.32□□□□□ -2.2
CLCNKAP51800 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 MIR4431-201ENST00000579990 94 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 GHRLOS.1-201ENST00000610995 70 ntBASIC1.32□□□□□ -2.2
CLCNKAP51800 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLCNKAP51800 Y_RNA.150-201ENST00000363562 102 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 RNU6-312P-201ENST00000364629 107 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 RNU6-321P-201ENST00000410912 106 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 RNU2-64P-201ENST00000411315 191 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
CLCNKAP51800 RNU6-165P-201ENST00000517170 99 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 MIR548AR-201ENST00000582191 57 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 AL096861.1-201ENST00000610899 123 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
CLCNKAP51800 RNU6-978P-201ENST00000364371 103 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 MIR570-201ENST00000384917 97 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CLCNKAP51800 RNU6-938P-201ENST00000411285 103 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
CLCNKAP51800 AF228730.3-201ENST00000436691 102 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 Y_RNA.662-201ENST00000516028 97 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 SNORD36C-201ENST00000516733 66 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 CYP3A52P-201ENST00000563326 91 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 MIR378D2-201ENST00000580636 98 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 MIR3129-201ENST00000581095 76 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 FTX_2.1-201ENST00000618816 94 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
CLCNKAP51800 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLCNKAP51800 Y_RNA.37-201ENST00000362606 108 ntBASIC1.29□□□□□ -2.2
CLCNKAP51800 MIR520C-201ENST00000385005 87 ntBASIC1.29□□□□□ -2.2
CLCNKAP51800 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CLCNKAP51800 RNU7-41P-201ENST00000515917 61 ntBASIC1.29□□□□□ -2.2
CLCNKAP51800 SNORD116-25-201ENST00000516517 92 ntBASIC1.29□□□□□ -2.2
CLCNKAP51800 MIR4764-201ENST00000580680 88 ntBASIC1.29□□□□□ -2.2
CLCNKAP51800 AL357312.1-201ENST00000603879 298 ntBASIC1.29□□□□□ -2.2
CLCNKAP51800 RNY1P10-201ENST00000363268 113 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 Y_RNA.241-201ENST00000364470 117 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 RNU6-1336P-201ENST00000383886 109 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 Y_RNA.494-201ENST00000384432 111 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 PCNPP3-201ENST00000393579 471 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 AC107027.2-201ENST00000512197 115 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 RNU7-43P-201ENST00000516554 64 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 MIR3192-201ENST00000584920 77 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
CLCNKAP51800 Y_RNA.270-201ENST00000364693 104 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 Y_RNA.521-201ENST00000384560 114 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 SNORD77.3-201ENST00000391113 65 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
CLCNKAP51800 AC005840.1-201ENST00000498412 377 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 TRMT112P2-201ENST00000512910 132 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 AP003484.1-201ENST00000530974 250 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 AC098479.1-201ENST00000609225 154 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 AC134878.1-201ENST00000619901 243 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.27□□□□□ -2.21
CLCNKAP51800 MIR376A2-201ENST00000636782 80 ntBASIC1.27□□□□□ -2.21
CLCNKAP51800 RNU4-84P-201ENST00000364200 139 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 Y_RNA.327-201ENST00000365201 102 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 Y_RNA.357-201ENST00000365487 109 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 Y_RNA.370-201ENST00000365589 108 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 RNU6-886P-201ENST00000384319 105 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 RNU6-768P-201ENST00000384683 107 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.26□□□□□ -2.21
CLCNKAP51800 snoU13.25-201ENST00000458945 104 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms