Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DNAJC19P2-201ENST00000593340 302 ntBASIC1.12□□□□□ -2.23
HCFC1P51610 AC022709.1-201ENST00000615967 87 ntBASIC1.12□□□□□ -2.23
HCFC1P51610 AC106754.2-201ENST00000623006 233 ntBASIC1.12□□□□□ -2.23
HCFC1P51610 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HCFC1P51610 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HCFC1P51610 Y_RNA.393-201ENST00000383936 102 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 RNU4-43P-201ENST00000410628 137 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 SNRPGP8-201ENST00000454064 226 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AC023790.1-201ENST00000482174 347 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AC008834.1-201ENST00000511612 175 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 RNU6-917P-201ENST00000516294 104 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AC112693.2-201ENST00000556538 232 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 MIR4764-201ENST00000580680 88 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AC098479.1-201ENST00000609225 154 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.11□□□□□ -2.23
HCFC1P51610 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.11□□□□□ -2.23
HCFC1P51610 Y_RNA.182-201ENST00000363880 111 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 RNA5SP259-201ENST00000365541 109 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 Y_RNA.621-201ENST00000411065 96 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.11□□□□□ -2.23
HCFC1P51610 AC074198.2-201ENST00000508153 258 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 SNORA18.7-201ENST00000516910 131 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 RNU7-181P-201ENST00000517234 74 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AL513534.2-201ENST00000603836 250 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 MIR6079-201ENST00000635807 62 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 AL161722.3-201ENST00000605789 2983 ntBASIC1.11□□□□□ -2.23
HCFC1P51610 SNORD115-28-201ENST00000363931 81 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 SNORD14E-201ENST00000364009 85 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 U8.5-201ENST00000364528 136 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 SNORA1.2-201ENST00000365189 134 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 SNORA24-201ENST00000384096 131 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 RNU6-187P-201ENST00000384139 106 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 MIR30A-201ENST00000385092 71 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 MIR613-201ENST00000385248 95 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 MIR320A-201ENST00000385302 82 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.1□□□□□ -2.23
HCFC1P51610 SEPT7P4-201ENST00000437076 306 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 AL138752.1-201ENST00000452964 351 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 Y_RNA.666-201ENST00000516187 112 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 SNORD45.4-201ENST00000516629 73 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 AL365265.1-201ENST00000621045 234 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 AC245060.5-201ENST00000610778 3293 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 RNU6-42P-201ENST00000384165 107 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 RNU6-768P-201ENST00000384683 107 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 RPS29P1-201ENST00000465274 159 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 RNU6-1116P-201ENST00000517269 99 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
HCFC1P51610 RNU6-125P-201ENST00000384505 107 ntBASIC1.09□□□□□ -2.24
HCFC1P51610 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.09□□□□□ -2.24
HCFC1P51610 PCNPP3-201ENST00000393579 471 ntBASIC1.09□□□□□ -2.24
HCFC1P51610 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.09□□□□□ -2.24
HCFC1P51610 RPL39P39-201ENST00000455840 151 ntBASIC1.09□□□□□ -2.24
HCFC1P51610 SNORA31.10-201ENST00000516482 106 ntBASIC1.09□□□□□ -2.24
HCFC1P51610 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.24
HCFC1P51610 MIR4422-201ENST00000581938 83 ntBASIC1.09□□□□□ -2.24
HCFC1P51610 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
HCFC1P51610 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
HCFC1P51610 Y_RNA.400-201ENST00000383963 111 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 MIR513A1-201ENST00000385138 129 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 U8.17-201ENST00000391292 132 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 MIR1185-1-201ENST00000408598 86 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 RNU2-70P-201ENST00000410718 179 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 RNU6-561P-201ENST00000516222 102 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 MIR3646-201ENST00000578301 84 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 AC015726.2-201ENST00000620112 122 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 AC008133.2-201ENST00000624540 351 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 ICE2P2-201ENST00000483823 2787 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 SNORD33-201ENST00000362761 85 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 Y_RNA.150-201ENST00000363562 102 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 Y_RNA.537-201ENST00000384626 109 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 MIR653-201ENST00000385279 96 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 MIR802-201ENST00000390235 94 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 RNA5SP127-201ENST00000411051 133 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 RNU7-43P-201ENST00000516554 64 ntBASIC1.08□□□□□ -2.24
HCFC1P51610 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HCFC1P51610 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.07□□□□□ -2.24
HCFC1P51610 Y_RNA.272-201ENST00000364696 102 ntBASIC1.07□□□□□ -2.24
HCFC1P51610 MIR520C-201ENST00000385005 87 ntBASIC1.07□□□□□ -2.24
HCFC1P51610 RNU6-1228P-201ENST00000391014 107 ntBASIC1.07□□□□□ -2.24
HCFC1P51610 RNU6-1054P-201ENST00000411293 104 ntBASIC1.07□□□□□ -2.24
HCFC1P51610 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.07□□□□□ -2.24
HCFC1P51610 MIR151B-201ENST00000584249 96 ntBASIC1.07□□□□□ -2.24
HCFC1P51610 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.07□□□□□ -2.24
HCFC1P51610 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HCFC1P51610 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.07□□□□□ -2.24
HCFC1P51610 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
HCFC1P51610 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.07□□□□□ -2.24
HCFC1P51610 RPL30P7-201ENST00000479312 323 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.06□□□□□ -2.24
HCFC1P51610 RNU6-998P-201ENST00000515894 101 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 RNU6-922P-201ENST00000516753 99 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 AL512310.8-201ENST00000550183 120 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 MIR3144-201ENST00000579460 79 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 AC134878.1-201ENST00000619901 243 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 AP000648.3-201ENST00000623539 4507 ntBASIC1.06□□□□□ -2.24
HCFC1P51610 RNU6-275P-201ENST00000364910 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms