Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 Y_RNA.37-201ENST00000362606 108 ntBASIC1.86□□□□□ -2.11
NPTX2P47972 Y_RNA.120-201ENST00000363304 110 ntBASIC1.86□□□□□ -2.11
NPTX2P47972 RNU6-203P-201ENST00000384038 104 ntBASIC1.86□□□□□ -2.11
NPTX2P47972 RNU6-971P-201ENST00000516920 106 ntBASIC1.86□□□□□ -2.11
NPTX2P47972 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.86□□□□□ -2.11
NPTX2P47972 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
NPTX2P47972 SNORD3E-202ENST00000627253 216 ntBASIC1.86□□□□□ -2.11
NPTX2P47972 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.86□□□□□ -2.11
NPTX2P47972 RNU6-938P-201ENST00000411285 103 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 AC108210.2-201ENST00000503681 201 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 RNU4-57P-201ENST00000515980 135 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 RNU6-830P-201ENST00000516353 107 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 MIR5197-201ENST00000583721 112 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 U7.2-201ENST00000607576 63 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 TUG1_4.1-201ENST00000619464 181 ntBASIC1.85□□□□□ -2.11
NPTX2P47972 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.85□□□□□ -2.11
NPTX2P47972 MTND5P32-201ENST00000560711 1802 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 RNA5SP190-201ENST00000365222 118 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 Y_RNA.410-201ENST00000383992 113 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 MIR516B2-201ENST00000385190 85 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 MIR1267-201ENST00000408723 78 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 RNU6-1211P-201ENST00000459179 105 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 SNORD36C-201ENST00000516733 66 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 MIR4524B-201ENST00000581569 115 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 AC011603.4-201ENST00000611325 277 ntBASIC1.84□□□□□ -2.11
NPTX2P47972 WWP1P1-201ENST00000466609 2769 ntBASIC1.84□□□□□ -2.12
NPTX2P47972 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
NPTX2P47972 RNU6-508P-201ENST00000363231 103 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 Y_RNA.218-201ENST00000364218 104 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 MIR539-201ENST00000365690 78 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 RNU6-1117P-201ENST00000384525 104 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 MIR194-1-201ENST00000384892 85 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 MIR526A1-201ENST00000384897 85 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 JTBP1-201ENST00000441314 247 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 SCARNA15-202ENST00000516881 127 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 MIR4285-201ENST00000581001 85 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 AC095038.3-201ENST00000634439 195 ntBASIC1.83□□□□□ -2.12
NPTX2P47972 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.83□□□□□ -2.12
NPTX2P47972 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.82□□□□□ -2.12
NPTX2P47972 RNU6-1123P-201ENST00000362347 106 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 Y_RNA.294-201ENST00000364916 102 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 AL603914.1-201ENST00000401964 204 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 MIR548I2-201ENST00000408348 149 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 AC087499.4-201ENST00000448505 178 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 SNORD13-201ENST00000459299 104 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 RNA5SP236-201ENST00000516169 116 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 Y_RNA.690-201ENST00000516603 95 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 RNU6-1149P-201ENST00000516810 97 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 AP003484.1-201ENST00000530974 250 ntBASIC1.82□□□□□ -2.12
NPTX2P47972 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NPTX2P47972 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
NPTX2P47972 RNU6-457P-201ENST00000363999 107 ntBASIC1.81□□□□□ -2.12
NPTX2P47972 SNORD18B-201ENST00000365659 72 ntBASIC1.81□□□□□ -2.12
NPTX2P47972 AL161935.2-201ENST00000414627 60 ntBASIC1.81□□□□□ -2.12
NPTX2P47972 Y_RNA.692-201ENST00000516627 105 ntBASIC1.81□□□□□ -2.12
NPTX2P47972 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.81□□□□□ -2.12
NPTX2P47972 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NPTX2P47972 Y_RNA.71-201ENST00000362892 104 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 RNU6-309P-201ENST00000364573 106 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 Y_RNA.440-201ENST00000384120 114 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 RNU6-22P-201ENST00000384355 107 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 MIR136-201ENST00000385207 82 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 AC004965.1-201ENST00000413033 213 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 RNU6-1234P-201ENST00000516877 103 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 RNU7-181P-201ENST00000517234 74 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 SNORA77B-201ENST00000578179 125 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 MIR3121-201ENST00000579680 77 ntBASIC1.8□□□□□ -2.12
NPTX2P47972 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.8□□□□□ -2.12
NPTX2P47972 RNA5SP99-201ENST00000364020 114 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 SNORA2.2-201ENST00000365473 135 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 U8.17-201ENST00000391292 132 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.79□□□□□ -2.12
NPTX2P47972 Y_RNA.651-201ENST00000459380 103 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 AC005908.1-201ENST00000468701 347 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 SUMO2P16-201ENST00000519475 264 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 Y_RNA.757-201ENST00000578934 114 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 MIR4422-201ENST00000581938 83 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 AL365222.1-201ENST00000614661 98 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 AC106754.2-201ENST00000623006 233 ntBASIC1.79□□□□□ -2.12
NPTX2P47972 Y_RNA.280-201ENST00000364765 112 ntBASIC1.78□□□□□ -2.12
NPTX2P47972 MTATP6P21-201ENST00000440681 189 ntBASIC1.78□□□□□ -2.12
NPTX2P47972 RNU6-62P-201ENST00000516526 102 ntBASIC1.78□□□□□ -2.12
NPTX2P47972 SNORA18.7-201ENST00000516910 131 ntBASIC1.78□□□□□ -2.12
NPTX2P47972 AL022345.2-201ENST00000606307 135 ntBASIC1.78□□□□□ -2.12
NPTX2P47972 AL353997.5-201ENST00000618886 171 ntBASIC1.78□□□□□ -2.12
NPTX2P47972 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
NPTX2P47972 Y_RNA.241-201ENST00000364470 117 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 Y_RNA.291-201ENST00000364886 113 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 SNORD116-14-201ENST00000383894 92 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 SNORD116-17-201ENST00000383929 92 ntBASIC1.77□□□□□ -2.13
NPTX2P47972 RNU6-80P-201ENST00000384195 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms