Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.478-201ENST00000384358 107 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 Y_RNA.486-201ENST00000384398 107 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 Y_RNA.537-201ENST00000384626 109 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 Y_RNA.547-201ENST00000384654 119 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 MIR568-201ENST00000385036 95 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 MIR616-201ENST00000385293 97 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 RNU6-1228P-201ENST00000391014 107 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 RNU6-651P-201ENST00000411040 105 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.96□□□□□ -2.26
NEDD4P46934 AC107297.1-201ENST00000459991 176 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.96□□□□□ -2.26
NEDD4P46934 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.96□□□□□ -2.26
NEDD4P46934 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.96□□□□□ -2.26
NEDD4P46934 RNU7-41P-201ENST00000515917 61 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 SCARNA8-201ENST00000515924 131 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 RNU4-57P-201ENST00000515980 135 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 Y_RNA.668-201ENST00000516233 93 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 RNA5SP480-201ENST00000516840 109 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 RNU11-2P-201ENST00000516898 142 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 RNU6-365P-201ENST00000517113 106 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 U4.1-201ENST00000620349 87 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 AC008133.2-201ENST00000624540 351 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 AC099654.10-201ENST00000640395 161 ntBASIC0.96□□□□□ -2.26
NEDD4P46934 Y_RNA.54-201ENST00000362766 105 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 Y_RNA.262-201ENST00000364641 102 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 Y_RNA.277-201ENST00000364754 102 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 Y_RNA.363-201ENST00000365529 113 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 MIR7-2-201ENST00000384970 110 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 MIR548O-201ENST00000408583 114 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.95□□□□□ -2.26
NEDD4P46934 MTND3P2-201ENST00000438452 342 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.95□□□□□ -2.26
NEDD4P46934 AC087499.4-201ENST00000448505 178 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.95□□□□□ -2.26
NEDD4P46934 snoU13.25-201ENST00000458945 104 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 RNU7-21P-201ENST00000459430 62 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 Y_RNA.666-201ENST00000516187 112 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 RNU6-1299P-201ENST00000516316 100 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 RNA5SP153-201ENST00000516498 76 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 RNU6-504P-201ENST00000516568 104 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 AL442067.1-201ENST00000613261 223 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 MIR4251-201ENST00000635819 61 ntBASIC0.95□□□□□ -2.26
NEDD4P46934 Y_RNA.572-201ENST00000384757 98 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 SNORD28B-201ENST00000390993 75 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 RNU2-38P-201ENST00000410856 79 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 RNU6-847P-201ENST00000411115 108 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 AC063976.4-201ENST00000421971 163 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 AC002429.1-201ENST00000437672 148 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 AL118496.2-201ENST00000448300 230 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 RNU7-90P-201ENST00000459216 62 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 RPS26P48-201ENST00000491713 339 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 RNU7-25P-201ENST00000516544 62 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 MIR4643-201ENST00000577473 78 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 AC108706.1-201ENST00000611053 297 ntBASIC0.94□□□□□ -2.26
NEDD4P46934 MIR103A2-201ENST00000362154 78 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 Y_RNA.292-201ENST00000364904 97 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 SNORD58.1-201ENST00000391313 66 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.93□□□□□ -2.26
NEDD4P46934 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.93□□□□□ -2.26
NEDD4P46934 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 RNU7-181P-201ENST00000517234 74 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 AC062037.2-201ENST00000610137 73 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.93□□□□□ -2.26
NEDD4P46934 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
NEDD4P46934 Y_RNA.20-201ENST00000362479 113 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 Y_RNA.76-201ENST00000362931 109 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 RNU6-653P-201ENST00000363074 106 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 RNU6-103P-201ENST00000363686 107 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 SNORD115-28-201ENST00000363931 81 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 Y_RNA.193-201ENST00000363979 102 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 SNORA51.10-201ENST00000384418 136 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 RNU2-13P-201ENST00000515909 113 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 RNU6-693P-201ENST00000516134 107 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 AC109810.1-201ENST00000534066 224 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 SEPT14P17-201ENST00000617978 177 ntBASIC0.92□□□□□ -2.26
NEDD4P46934 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NEDD4P46934 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.92□□□□□ -2.26
NEDD4P46934 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-34-201ENST00000362441 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-12-201ENST00000362583 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-29-201ENST00000362834 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-9-201ENST00000362912 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-21-201ENST00000362963 81 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 RNU6-888P-201ENST00000363010 101 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-14-201ENST00000363090 81 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-13-201ENST00000363358 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD114-26-201ENST00000363543 72 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-41-201ENST00000363608 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-11-201ENST00000363616 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-5-201ENST00000363633 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-39-201ENST00000363694 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-4-201ENST00000363810 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-16-201ENST00000363887 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-6-201ENST00000363942 82 ntBASIC0.91□□□□□ -2.26
NEDD4P46934 SNORD115-42-201ENST00000364273 82 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 250.8 ms