Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 Y_RNA.644-201ENST00000459006 113 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 RN7SKP164-201ENST00000516138 266 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 Y_RNA.674-201ENST00000516362 113 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 RNU6-113P-201ENST00000516653 101 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 Y_RNA.700-201ENST00000516806 100 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 AC022559.1-201ENST00000520905 205 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 MIR2681-201ENST00000581814 105 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 AL391903.3-201ENST00000612158 163 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 JPX_2.1-201ENST00000614161 69 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
MTHFRP42898 Y_RNA.36-201ENST00000362602 112 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 snoU2-30.1-201ENST00000365012 70 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 Y_RNA.336-201ENST00000365307 109 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 Y_RNA.571-201ENST00000384753 98 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.22□□□□□ -2.21
MTHFRP42898 SNORD77.4-201ENST00000516158 81 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 RNU6-561P-201ENST00000516222 102 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 Y_RNA.714-201ENST00000517065 90 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 SNORA81.3-201ENST00000517283 198 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
MTHFRP42898 AC008507.4-201ENST00000585464 127 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 AL049861.1-201ENST00000603130 150 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 AL357312.1-201ENST00000603879 298 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 uc_338.4-201ENST00000616635 176 ntBASIC1.22□□□□□ -2.21
MTHFRP42898 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
MTHFRP42898 Y_RNA.7-201ENST00000362352 102 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 RNU6-1020P-201ENST00000363684 107 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 RNU6-484P-201ENST00000384016 107 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 SNORD72-201ENST00000390994 80 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.21□□□□□ -2.22
MTHFRP42898 RNU7-120P-201ENST00000459334 63 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.21□□□□□ -2.22
MTHFRP42898 SNORA31.2-201ENST00000516019 134 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 RNU2-4P-201ENST00000606190 192 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 MIR6779-201ENST00000617283 64 ntBASIC1.21□□□□□ -2.22
MTHFRP42898 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
MTHFRP42898 Y_RNA.29-201ENST00000362570 113 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 Y_RNA.121-201ENST00000363309 113 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 RNU6-682P-201ENST00000363843 106 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 Y_RNA.233-201ENST00000364407 101 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 RNU6-1138P-201ENST00000365359 106 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 Y_RNA.412-201ENST00000384001 104 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
MTHFRP42898 AL606845.1-201ENST00000404881 255 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
MTHFRP42898 AL138752.1-201ENST00000452964 351 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 AC090142.3-201ENST00000519012 385 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.2□□□□□ -2.22
MTHFRP42898 AC087685.1-201ENST00000587507 141 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 AC108706.1-201ENST00000611053 297 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 AC004792.1-201ENST00000614523 137 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
MTHFRP42898 RNU6-103P-201ENST00000363686 107 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 SNORD14E-201ENST00000364009 85 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RNY3P5-201ENST00000384127 102 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RNU6-1228P-201ENST00000391014 107 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 Y_RNA.587-201ENST00000391210 103 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 PCNPP3-201ENST00000393579 471 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 Y_RNA.793-201ENST00000411222 111 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 HMGN2P32-201ENST00000444648 269 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 SNRPGP8-201ENST00000454064 226 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RNU6-1219P-201ENST00000516143 112 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RNU6-1007P-201ENST00000516586 107 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RNU7-149P-201ENST00000516739 59 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 AC109810.1-201ENST00000534066 224 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 AP002392.1-201ENST00000537692 208 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 MIR4744-201ENST00000581563 82 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 AC097639.2-201ENST00000603159 172 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
MTHFRP42898 Y_RNA.75-201ENST00000362927 97 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 SNORD45.3-201ENST00000363836 72 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 Y_RNA.486-201ENST00000384398 107 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 MIR136-201ENST00000385207 82 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 RNU6-578P-201ENST00000390980 103 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 MTND5P15-201ENST00000434246 349 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 RPS29P29-201ENST00000456396 171 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 MIR3668-201ENST00000582138 75 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 AC072026.1-201ENST00000605023 201 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 AL096861.1-201ENST00000610899 123 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 FTX_2.1-201ENST00000618816 94 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 U6.106-201ENST00000636360 105 ntBASIC1.18□□□□□ -2.22
MTHFRP42898 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
MTHFRP42898 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
MTHFRP42898 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
MTHFRP42898 Y_RNA.182-201ENST00000363880 111 ntBASIC1.17□□□□□ -2.22
MTHFRP42898 RNU6-275P-201ENST00000364910 107 ntBASIC1.17□□□□□ -2.22
MTHFRP42898 RNU4-70P-201ENST00000384579 139 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms