Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.28□□□□□ -2.61
HTTP42858 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.28□□□□□ -2.61
HTTP42858 AL365203.2-201ENST00000423444 196 ntBASIC-1.28□□□□□ -2.61
HTTP42858 AC072046.2-201ENST00000618366 268 ntBASIC-1.28□□□□□ -2.61
HTTP42858 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.28□□□□□ -2.61
HTTP42858 AC007671.2-201ENST00000637344 619 ntBASIC-1.28□□□□□ -2.61
HTTP42858 MIR342-201ENST00000362212 99 ntBASIC-1.28□□□□□ -2.61
HTTP42858 RNA5SP403-201ENST00000363598 108 ntBASIC-1.28□□□□□ -2.61
HTTP42858 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.28□□□□□ -2.61
HTTP42858 SNORD75.2-201ENST00000408784 58 ntBASIC-1.28□□□□□ -2.61
HTTP42858 MTND4P24-201ENST00000424002 397 ntBASIC-1.28□□□□□ -2.61
HTTP42858 MTCO2P3-201ENST00000442543 421 ntBASIC-1.28□□□□□ -2.61
HTTP42858 MIR6717-201ENST00000622747 73 ntBASIC-1.28□□□□□ -2.61
HTTP42858 SNORD51.1-201ENST00000365405 77 ntBASIC-1.29□□□□□ -2.62
HTTP42858 SNORA20.2-201ENST00000383922 131 ntBASIC-1.29□□□□□ -2.62
HTTP42858 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.29□□□□□ -2.62
HTTP42858 RNU2-51P-201ENST00000410708 197 ntBASIC-1.29□□□□□ -2.62
HTTP42858 TRAJ51-201ENST00000504127 63 ntBASIC-1.29□□□□□ -2.62
HTTP42858 MTND2P32-201ENST00000521584 1038 ntBASIC-1.29□□□□□ -2.62
HTTP42858 AL391262.2-201ENST00000622466 494 ntBASIC-1.29□□□□□ -2.62
HTTP42858 RNY1P11-201ENST00000363759 113 ntBASIC-1.29□□□□□ -2.62
HTTP42858 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.29□□□□□ -2.62
HTTP42858 RNU6-407P-201ENST00000365280 104 ntBASIC-1.29□□□□□ -2.62
HTTP42858 RNY3P4-201ENST00000384428 101 ntBASIC-1.29□□□□□ -2.62
HTTP42858 RNU6-913P-201ENST00000390913 95 ntBASIC-1.29□□□□□ -2.62
HTTP42858 SNORA25.10-201ENST00000515926 124 ntBASIC-1.29□□□□□ -2.62
HTTP42858 AC055872.1-201ENST00000570978 278 ntBASIC-1.29□□□□□ -2.62
HTTP42858 AC008507.2-201ENST00000588402 1176 ntBASIC-1.29□□□□□ -2.62
HTTP42858 AP002782.1-201ENST00000623107 614 ntBASIC-1.29□□□□□ -2.62
HTTP42858 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.29□□□□□ -2.62
HTTP42858 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.29□□□□□ -2.62
HTTP42858 RNU6-827P-201ENST00000365553 106 ntBASIC-1.29□□□□□ -2.62
HTTP42858 MIR548A2-201ENST00000384956 97 ntBASIC-1.29□□□□□ -2.62
HTTP42858 AL606845.1-201ENST00000404881 255 ntBASIC-1.29□□□□□ -2.62
HTTP42858 MIR4756-201ENST00000577874 78 ntBASIC-1.29□□□□□ -2.62
HTTP42858 AC019226.2-201ENST00000625973 424 ntBASIC-1.29□□□□□ -2.62
HTTP42858 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.3□□□□□ -2.62
HTTP42858 SNORA18-201ENST00000384416 132 ntBASIC-1.3□□□□□ -2.62
HTTP42858 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
HTTP42858 SNORA26.6-201ENST00000391256 115 ntBASIC-1.3□□□□□ -2.62
HTTP42858 TIMM9P2-201ENST00000419324 266 ntBASIC-1.3□□□□□ -2.62
HTTP42858 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.3□□□□□ -2.62
HTTP42858 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.3□□□□□ -2.62
HTTP42858 RNU6-693P-201ENST00000516134 107 ntBASIC-1.3□□□□□ -2.62
HTTP42858 RNU6-150P-201ENST00000516237 95 ntBASIC-1.3□□□□□ -2.62
HTTP42858 AC123904.2-201ENST00000548059 300 ntBASIC-1.3□□□□□ -2.62
HTTP42858 MIR4460-201ENST00000577862 86 ntBASIC-1.3□□□□□ -2.62
HTTP42858 RNU6-597P-201ENST00000365620 102 ntBASIC-1.3□□□□□ -2.62
HTTP42858 AC018880.2-201ENST00000414265 201 ntBASIC-1.3□□□□□ -2.62
HTTP42858 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.3□□□□□ -2.62
HTTP42858 AC108081.1-201ENST00000604358 221 ntBASIC-1.3□□□□□ -2.62
HTTP42858 MIR6773-201ENST00000612812 74 ntBASIC-1.3□□□□□ -2.62
HTTP42858 MIR376A2-201ENST00000636782 80 ntBASIC-1.3□□□□□ -2.62
HTTP42858 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.31□□□□□ -2.62
HTTP42858 RNU6-553P-201ENST00000364047 96 ntBASIC-1.31□□□□□ -2.62
HTTP42858 AC137499.1-201ENST00000427602 88 ntBASIC-1.31□□□□□ -2.62
HTTP42858 MTCO1P57-201ENST00000432182 261 ntBASIC-1.31□□□□□ -2.62
HTTP42858 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.31□□□□□ -2.62
HTTP42858 AC005828.6-201ENST00000606610 232 ntBASIC-1.31□□□□□ -2.62
HTTP42858 AL008718.3-201ENST00000610217 321 ntBASIC-1.31□□□□□ -2.62
HTTP42858 AC022418.1-201ENST00000624118 445 ntBASIC-1.31□□□□□ -2.62
HTTP42858 U6.115-201ENST00000636045 103 ntBASIC-1.31□□□□□ -2.62
HTTP42858 RNY1P13-201ENST00000365030 105 ntBASIC-1.31□□□□□ -2.62
HTTP42858 MIR519E-201ENST00000385075 84 ntBASIC-1.31□□□□□ -2.62
HTTP42858 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.31□□□□□ -2.62
HTTP42858 BX295541.1-201ENST00000417774 250 ntBASIC-1.31□□□□□ -2.62
HTTP42858 RPS3AP52-201ENST00000435639 297 ntBASIC-1.31□□□□□ -2.62
HTTP42858 RNU6-280P-201ENST00000364145 104 ntBASIC-1.31□□□□□ -2.62
HTTP42858 SNORA62.4-201ENST00000365504 151 ntBASIC-1.31□□□□□ -2.62
HTTP42858 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.31□□□□□ -2.62
HTTP42858 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.31□□□□□ -2.62
HTTP42858 RN7SKP299-201ENST00000606679 301 ntBASIC-1.31□□□□□ -2.62
HTTP42858 AC092807.2-201ENST00000609367 243 ntBASIC-1.31□□□□□ -2.62
HTTP42858 AC097460.3-201ENST00000623099 442 ntBASIC-1.31□□□□□ -2.62
HTTP42858 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.31□□□□□ -2.62
HTTP42858 RNA5SP26-201ENST00000362406 119 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.32□□□□□ -2.62
HTTP42858 RNU6-685P-201ENST00000517088 95 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AC069113.1-201ENST00000517763 267 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AC133104.2-201ENST00000615272 193 ntBASIC-1.32□□□□□ -2.62
HTTP42858 RNY1P2-201ENST00000364820 117 ntBASIC-1.32□□□□□ -2.62
HTTP42858 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.32□□□□□ -2.62
HTTP42858 MIR548I2-201ENST00000408348 149 ntBASIC-1.32□□□□□ -2.62
HTTP42858 U8.22-201ENST00000459141 133 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.32□□□□□ -2.62
HTTP42858 AC145350.1-201ENST00000567426 208 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.32□□□□□ -2.62
HTTP42858 MIR4500-201ENST00000579472 76 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AC008507.4-201ENST00000585464 127 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AC027449.1-201ENST00000608890 407 ntBASIC-1.32□□□□□ -2.62
HTTP42858 AL157770.1-201ENST00000623049 439 ntBASIC-1.32□□□□□ -2.62
HTTP42858 MIR6874-201ENST00000635894 71 ntBASIC-1.32□□□□□ -2.62
HTTP42858 MIR1278-201ENST00000408753 81 ntBASIC-1.33□□□□□ -2.62
HTTP42858 AL354751.2-201ENST00000415471 210 ntBASIC-1.33□□□□□ -2.62
HTTP42858 MTCO2P16-201ENST00000436962 677 ntBASIC-1.33□□□□□ -2.62
HTTP42858 MTND2P6-201ENST00000455337 1030 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.33□□□□□ -2.62
HTTP42858 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.33□□□□□ -2.62
HTTP42858 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms