Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 RNU6-616P-201ENST00000384353 107 ntBASIC2.69□□□□□ -1.98
SOX18P35713 SNORA18-201ENST00000384416 132 ntBASIC2.69□□□□□ -1.98
SOX18P35713 MIR518A2-201ENST00000384966 87 ntBASIC2.69□□□□□ -1.98
SOX18P35713 RNU6-644P-201ENST00000391155 98 ntBASIC2.69□□□□□ -1.98
SOX18P35713 RNA5SP465-201ENST00000391195 109 ntBASIC2.69□□□□□ -1.98
SOX18P35713 RNA5SP261-201ENST00000410536 106 ntBASIC2.69□□□□□ -1.98
SOX18P35713 RNU6-1190P-201ENST00000410811 104 ntBASIC2.69□□□□□ -1.98
SOX18P35713 DNAJC19P9-201ENST00000555084 351 ntBASIC2.69□□□□□ -1.98
SOX18P35713 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
SOX18P35713 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.69□□□□□ -1.98
SOX18P35713 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SOX18P35713 MIR449A-201ENST00000362113 91 ntBASIC2.68□□□□□ -1.98
SOX18P35713 Y_RNA.290-201ENST00000364879 114 ntBASIC2.68□□□□□ -1.98
SOX18P35713 SNORA32-201ENST00000384072 121 ntBASIC2.68□□□□□ -1.98
SOX18P35713 SNORD28B-201ENST00000390993 75 ntBASIC2.68□□□□□ -1.98
SOX18P35713 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
SOX18P35713 Y_RNA.659-201ENST00000515994 113 ntBASIC2.68□□□□□ -1.98
SOX18P35713 SCARNA16.3-201ENST00000516595 184 ntBASIC2.68□□□□□ -1.98
SOX18P35713 AC021506.2-201ENST00000612354 169 ntBASIC2.68□□□□□ -1.98
SOX18P35713 MIR6715A-201ENST00000615929 79 ntBASIC2.68□□□□□ -1.98
SOX18P35713 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SOX18P35713 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SOX18P35713 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SOX18P35713 RNU6-679P-201ENST00000391003 106 ntBASIC2.67□□□□□ -1.98
SOX18P35713 RNU6-592P-201ENST00000411333 103 ntBASIC2.67□□□□□ -1.98
SOX18P35713 AC004941.2-201ENST00000427009 228 ntBASIC2.67□□□□□ -1.98
SOX18P35713 SNORD123-201ENST00000459473 70 ntBASIC2.67□□□□□ -1.98
SOX18P35713 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.67□□□□□ -1.98
SOX18P35713 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.67□□□□□ -1.98
SOX18P35713 AC079600.2-201ENST00000550076 130 ntBASIC2.67□□□□□ -1.98
SOX18P35713 MIR4658-201ENST00000584344 65 ntBASIC2.67□□□□□ -1.98
SOX18P35713 MIR548Z-201ENST00000584743 97 ntBASIC2.67□□□□□ -1.98
SOX18P35713 U7.3-201ENST00000616123 62 ntBASIC2.67□□□□□ -1.98
SOX18P35713 AC243994.1-201ENST00000618627 109 ntBASIC2.67□□□□□ -1.98
SOX18P35713 SNORD3E-202ENST00000627253 216 ntBASIC2.67□□□□□ -1.98
SOX18P35713 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SOX18P35713 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SOX18P35713 SNORD115-2-201ENST00000362842 82 ntBASIC2.66□□□□□ -1.98
SOX18P35713 SNORD115-20-201ENST00000365099 82 ntBASIC2.66□□□□□ -1.98
SOX18P35713 SNORA9.2-201ENST00000365361 133 ntBASIC2.66□□□□□ -1.98
SOX18P35713 SNORA48.1-201ENST00000390879 135 ntBASIC2.66□□□□□ -1.98
SOX18P35713 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.66□□□□□ -1.98
SOX18P35713 AC022254.1-201ENST00000567857 235 ntBASIC2.66□□□□□ -1.98
SOX18P35713 MIR3945-201ENST00000581853 98 ntBASIC2.66□□□□□ -1.98
SOX18P35713 MIR548AR-201ENST00000582191 57 ntBASIC2.66□□□□□ -1.98
SOX18P35713 AL513423.1-201ENST00000621695 132 ntBASIC2.66□□□□□ -1.98
SOX18P35713 MIR6717-201ENST00000622747 73 ntBASIC2.66□□□□□ -1.98
SOX18P35713 MIR6841-201ENST00000637129 72 ntBASIC2.66□□□□□ -1.98
SOX18P35713 AL512310.12-203ENST00000640543 90 ntBASIC2.66□□□□□ -1.98
SOX18P35713 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SOX18P35713 AL161431.1-201ENST00000618966 4205 ntBASIC2.65□□□□□ -1.98
SOX18P35713 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
SOX18P35713 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SOX18P35713 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SOX18P35713 Y_RNA.17-201ENST00000362433 111 ntBASIC2.65□□□□□ -1.99
SOX18P35713 RNY1P10-201ENST00000363268 113 ntBASIC2.65□□□□□ -1.99
SOX18P35713 SNORD45B-201ENST00000364617 72 ntBASIC2.65□□□□□ -1.99
SOX18P35713 U8.9-201ENST00000365667 134 ntBASIC2.65□□□□□ -1.99
SOX18P35713 MIR526A1-201ENST00000384897 85 ntBASIC2.65□□□□□ -1.99
SOX18P35713 MIR660-201ENST00000385235 97 ntBASIC2.65□□□□□ -1.99
SOX18P35713 RNU6-913P-201ENST00000390913 95 ntBASIC2.65□□□□□ -1.99
SOX18P35713 Y_RNA.593-201ENST00000410292 98 ntBASIC2.65□□□□□ -1.99
SOX18P35713 RNA5SP501-201ENST00000410990 112 ntBASIC2.65□□□□□ -1.99
SOX18P35713 MRPL35P3-201ENST00000421557 364 ntBASIC2.65□□□□□ -1.99
SOX18P35713 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
SOX18P35713 AL353813.1-201ENST00000440700 253 ntBASIC2.65□□□□□ -1.99
SOX18P35713 snoU13.27-201ENST00000459278 104 ntBASIC2.65□□□□□ -1.99
SOX18P35713 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SOX18P35713 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SOX18P35713 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SOX18P35713 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SOX18P35713 RNA5SP432-201ENST00000362480 116 ntBASIC2.64□□□□□ -1.99
SOX18P35713 RNU6-1067P-201ENST00000384752 107 ntBASIC2.64□□□□□ -1.99
SOX18P35713 MIR512-1-201ENST00000384913 84 ntBASIC2.64□□□□□ -1.99
SOX18P35713 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SOX18P35713 SNORA26.6-201ENST00000391256 115 ntBASIC2.64□□□□□ -1.99
SOX18P35713 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
SOX18P35713 RN7SKP132-201ENST00000516001 208 ntBASIC2.64□□□□□ -1.99
SOX18P35713 RNU6-521P-201ENST00000516663 105 ntBASIC2.64□□□□□ -1.99
SOX18P35713 MIR3162-201ENST00000581818 82 ntBASIC2.64□□□□□ -1.99
SOX18P35713 AL020996.3-201ENST00000606617 222 ntBASIC2.64□□□□□ -1.99
SOX18P35713 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.64□□□□□ -1.99
SOX18P35713 AC091304.10-201ENST00000641554 121 ntBASIC2.64□□□□□ -1.99
SOX18P35713 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SOX18P35713 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
SOX18P35713 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SOX18P35713 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SOX18P35713 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SOX18P35713 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SOX18P35713 SNORA24-201ENST00000384096 131 ntBASIC2.63□□□□□ -1.99
SOX18P35713 RNU6-851P-201ENST00000384565 107 ntBASIC2.63□□□□□ -1.99
SOX18P35713 RNA5SP492-201ENST00000411330 114 ntBASIC2.63□□□□□ -1.99
SOX18P35713 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
SOX18P35713 MIR1270-201ENST00000459320 83 ntBASIC2.63□□□□□ -1.99
SOX18P35713 RNU2-13P-201ENST00000515909 113 ntBASIC2.63□□□□□ -1.99
SOX18P35713 RNA5SP481-201ENST00000516814 122 ntBASIC2.63□□□□□ -1.99
SOX18P35713 FAM106DP-201ENST00000586416 501 ntBASIC2.63□□□□□ -1.99
SOX18P35713 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
SOX18P35713 RNU6-112P-201ENST00000363599 104 ntBASIC2.62□□□□□ -1.99
SOX18P35713 RNU6-60P-201ENST00000364792 103 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms