Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SNORA31.15-201ENST00000516771 132 ntBASIC3.31□□□□□ -1.88
CLCN1P35523 RNA5SP481-201ENST00000516814 122 ntBASIC3.31□□□□□ -1.88
CLCN1P35523 AL020996.3-201ENST00000606617 222 ntBASIC3.31□□□□□ -1.88
CLCN1P35523 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLCN1P35523 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CLCN1P35523 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 RNU6-112P-201ENST00000363599 104 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 DEFA7P-201ENST00000382676 285 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 SNORA32-201ENST00000384072 121 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 SNORD67-201ENST00000390833 111 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 RNU6-913P-201ENST00000390913 95 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 AC096949.1-201ENST00000412047 152 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 RNU7-73P-201ENST00000458743 63 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 U7.3-201ENST00000616123 62 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 FO624990.1-201ENST00000636373 85 ntBASIC3.3□□□□□ -1.88
CLCN1P35523 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN1P35523 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN1P35523 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCN1P35523 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCN1P35523 MIR6073-201ENST00000352083 89 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 SNORD45B-201ENST00000364617 72 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 Y_RNA.430-201ENST00000384081 110 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 RNU6-296P-201ENST00000384608 107 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 SNORD15B-201ENST00000384714 146 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 RNU6-1067P-201ENST00000384752 107 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCN1P35523 RNU6-521P-201ENST00000516663 105 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 MIR548Z-201ENST00000584743 97 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 RPL12P50-201ENST00000603116 116 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 MIR622-201ENST00000638396 96 ntBASIC3.29□□□□□ -1.88
CLCN1P35523 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCN1P35523 AC073325.2-201ENST00000339545 159 ntBASIC3.28□□□□□ -1.88
CLCN1P35523 RNU6-592P-201ENST00000411333 103 ntBASIC3.28□□□□□ -1.88
CLCN1P35523 UBE2DNL-203ENST00000474922 222 ntBASIC3.28□□□□□ -1.88
CLCN1P35523 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN1P35523 Y_RNA.659-201ENST00000515994 113 ntBASIC3.28□□□□□ -1.88
CLCN1P35523 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCN1P35523 AL512310.12-203ENST00000640543 90 ntBASIC3.28□□□□□ -1.88
CLCN1P35523 AL035425.3-201ENST00000564206 4996 ntBASIC3.28□□□□□ -1.89
CLCN1P35523 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CLCN1P35523 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCN1P35523 MAPK10-266ENST00000641066 6555 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 Y_RNA.17-201ENST00000362433 111 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 Y_RNA.593-201ENST00000410292 98 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 AC105272.1-201ENST00000438604 198 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 MIR1270-201ENST00000459320 83 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 AC022254.1-201ENST00000567857 235 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 MIR5004-201ENST00000579078 107 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 FAM106DP-201ENST00000586416 501 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 AC006023.1-201ENST00000603944 259 ntBASIC3.27□□□□□ -1.89
CLCN1P35523 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CLCN1P35523 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCN1P35523 Y_RNA.96-201ENST00000363092 109 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 RNY1P10-201ENST00000363268 113 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 RNU6-60P-201ENST00000364792 103 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 Y_RNA.377-201ENST00000365644 108 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 RNU6-1201P-201ENST00000384227 107 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 MRPL35P3-201ENST00000421557 364 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 AC099513.1-201ENST00000490423 301 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 RNU6-1018P-201ENST00000516577 106 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 AL049779.4-201ENST00000604500 156 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 AC007318.2-201ENST00000620999 243 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 AC091304.10-201ENST00000641554 121 ntBASIC3.26□□□□□ -1.89
CLCN1P35523 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
CLCN1P35523 Y_RNA.537-201ENST00000384626 109 ntBASIC3.25□□□□□ -1.89
CLCN1P35523 RPL23AP6-201ENST00000446637 472 ntBASIC3.25□□□□□ -1.89
CLCN1P35523 RNA5SP402-201ENST00000517148 110 ntBASIC3.25□□□□□ -1.89
CLCN1P35523 MIR8057-201ENST00000620957 69 ntBASIC3.25□□□□□ -1.89
CLCN1P35523 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLCN1P35523 RNU1-138P-201ENST00000384093 164 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 RNU6-1152P-201ENST00000384576 107 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 RNA5SP181-201ENST00000410246 98 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 RNA5SP270-201ENST00000411361 118 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 HMGN1P33-201ENST00000432945 451 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 SNORA9.3-201ENST00000516383 129 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 MIR4777-201ENST00000583710 86 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 AC096720.1-201ENST00000604441 183 ntBASIC3.24□□□□□ -1.89
CLCN1P35523 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCN1P35523 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CLCN1P35523 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCN1P35523 MIR424-201ENST00000362227 98 ntBASIC3.23□□□□□ -1.89
CLCN1P35523 Y_RNA.95-201ENST00000363079 95 ntBASIC3.23□□□□□ -1.89
CLCN1P35523 RNU1-51P-201ENST00000365345 176 ntBASIC3.23□□□□□ -1.89
CLCN1P35523 AC008885.1-201ENST00000514930 301 ntBASIC3.23□□□□□ -1.89
CLCN1P35523 U1.36-201ENST00000620684 176 ntBASIC3.23□□□□□ -1.89
CLCN1P35523 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLCN1P35523 MIR22-201ENST00000362190 85 ntBASIC3.22□□□□□ -1.89
CLCN1P35523 RNU6-457P-201ENST00000363999 107 ntBASIC3.22□□□□□ -1.89
CLCN1P35523 SNORA1.1-201ENST00000364671 133 ntBASIC3.22□□□□□ -1.89
CLCN1P35523 RNU6-1275P-201ENST00000391087 107 ntBASIC3.22□□□□□ -1.89
CLCN1P35523 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.22□□□□□ -1.89
CLCN1P35523 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCN1P35523 RNU6-1313P-201ENST00000362622 102 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 RNY1P1-201ENST00000364372 112 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 BTF3P4-201ENST00000418852 495 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 snoU13.16-201ENST00000459350 104 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 SNORA31.11-201ENST00000516528 139 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 Y_RNA.705-201ENST00000516862 110 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 SNORA74.3-201ENST00000517108 154 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms