Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CD40P25942 AL596211.1-201ENST00000569873 2277 ntBASIC1.89□□□□□ -2.11
CD40P25942 RNU1-133P-201ENST00000364867 167 ntBASIC1.89□□□□□ -2.11
CD40P25942 SNORA67.3-201ENST00000384366 140 ntBASIC1.89□□□□□ -2.11
CD40P25942 RNU6-1117P-201ENST00000384525 104 ntBASIC1.89□□□□□ -2.11
CD40P25942 RNU7-80P-201ENST00000459562 61 ntBASIC1.89□□□□□ -2.11
CD40P25942 RNU6-1234P-201ENST00000516877 103 ntBASIC1.89□□□□□ -2.11
CD40P25942 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
CD40P25942 AC091932.4-201ENST00000623386 200 ntBASIC1.89□□□□□ -2.11
CD40P25942 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD40P25942 Y_RNA.114-201ENST00000363265 113 ntBASIC1.88□□□□□ -2.11
CD40P25942 MIR520C-201ENST00000385005 87 ntBASIC1.88□□□□□ -2.11
CD40P25942 snoU13.26-201ENST00000459452 105 ntBASIC1.88□□□□□ -2.11
CD40P25942 RNU7-96P-201ENST00000459535 64 ntBASIC1.88□□□□□ -2.11
CD40P25942 RNU6-998P-201ENST00000515894 101 ntBASIC1.88□□□□□ -2.11
CD40P25942 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
CD40P25942 MIR4764-201ENST00000580680 88 ntBASIC1.88□□□□□ -2.11
CD40P25942 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.88□□□□□ -2.11
CD40P25942 AL137847.3-201ENST00000611521 109 ntBASIC1.88□□□□□ -2.11
CD40P25942 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.88□□□□□ -2.11
CD40P25942 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
CD40P25942 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
CD40P25942 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
CD40P25942 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CD40P25942 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.87□□□□□ -2.11
CD40P25942 RNU6-235P-201ENST00000362644 107 ntBASIC1.87□□□□□ -2.11
CD40P25942 Y_RNA.71-201ENST00000362892 104 ntBASIC1.87□□□□□ -2.11
CD40P25942 Y_RNA.454-201ENST00000384224 113 ntBASIC1.87□□□□□ -2.11
CD40P25942 SNORA64-201ENST00000384674 134 ntBASIC1.87□□□□□ -2.11
CD40P25942 RNU6-1067P-201ENST00000384752 107 ntBASIC1.87□□□□□ -2.11
CD40P25942 SNORD41-201ENST00000386967 70 ntBASIC1.87□□□□□ -2.11
CD40P25942 SNORA48.3-201ENST00000391081 134 ntBASIC1.87□□□□□ -2.11
CD40P25942 RNU7-67P-201ENST00000459003 62 ntBASIC1.87□□□□□ -2.11
CD40P25942 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
CD40P25942 RNU7-43P-201ENST00000516554 64 ntBASIC1.87□□□□□ -2.11
CD40P25942 MIR4791-201ENST00000607666 84 ntBASIC1.87□□□□□ -2.11
CD40P25942 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
CD40P25942 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CD40P25942 MIR302B-201ENST00000362188 73 ntBASIC1.86□□□□□ -2.11
CD40P25942 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
CD40P25942 SNORA70.7-201ENST00000384159 133 ntBASIC1.86□□□□□ -2.11
CD40P25942 RPS29P29-201ENST00000456396 171 ntBASIC1.86□□□□□ -2.11
CD40P25942 RNU2-11P-201ENST00000459191 187 ntBASIC1.86□□□□□ -2.11
CD40P25942 UBL5P3-201ENST00000475112 231 ntBASIC1.86□□□□□ -2.11
CD40P25942 RNU2-13P-201ENST00000515909 113 ntBASIC1.86□□□□□ -2.11
CD40P25942 SNORD111.1-201ENST00000516421 86 ntBASIC1.86□□□□□ -2.11
CD40P25942 RNU6-958P-201ENST00000516995 106 ntBASIC1.86□□□□□ -2.11
CD40P25942 AL513534.2-201ENST00000603836 250 ntBASIC1.86□□□□□ -2.11
CD40P25942 AC243994.1-201ENST00000618627 109 ntBASIC1.86□□□□□ -2.11
CD40P25942 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CD40P25942 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
CD40P25942 RNU6-22P-201ENST00000384355 107 ntBASIC1.85□□□□□ -2.11
CD40P25942 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
CD40P25942 AL035398.1-201ENST00000430869 322 ntBASIC1.85□□□□□ -2.11
CD40P25942 AL158147.1-201ENST00000443970 75 ntBASIC1.85□□□□□ -2.11
CD40P25942 AC079140.2-201ENST00000506193 142 ntBASIC1.85□□□□□ -2.11
CD40P25942 SNORA31.11-201ENST00000516528 139 ntBASIC1.85□□□□□ -2.11
CD40P25942 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
CD40P25942 AC104984.5-201ENST00000586878 94 ntBASIC1.85□□□□□ -2.11
CD40P25942 AC108081.1-201ENST00000604358 221 ntBASIC1.85□□□□□ -2.11
CD40P25942 AL365222.1-201ENST00000614661 98 ntBASIC1.85□□□□□ -2.11
CD40P25942 MIR6715A-201ENST00000615929 79 ntBASIC1.85□□□□□ -2.11
CD40P25942 AC008133.2-201ENST00000624540 351 ntBASIC1.85□□□□□ -2.11
CD40P25942 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CD40P25942 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CD40P25942 Y_RNA.280-201ENST00000364765 112 ntBASIC1.84□□□□□ -2.11
CD40P25942 RNY1P6-201ENST00000384193 109 ntBASIC1.84□□□□□ -2.11
CD40P25942 RNU6-80P-201ENST00000384195 107 ntBASIC1.84□□□□□ -2.11
CD40P25942 SNORA51.10-201ENST00000384418 136 ntBASIC1.84□□□□□ -2.11
CD40P25942 Y_RNA.537-201ENST00000384626 109 ntBASIC1.84□□□□□ -2.11
CD40P25942 RNU6-240P-201ENST00000516098 97 ntBASIC1.84□□□□□ -2.11
CD40P25942 RNU6-62P-201ENST00000516526 102 ntBASIC1.84□□□□□ -2.11
CD40P25942 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.11
CD40P25942 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.84□□□□□ -2.11
CD40P25942 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.84□□□□□ -2.11
CD40P25942 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CD40P25942 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CD40P25942 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
CD40P25942 AC092881.1-201ENST00000638218 2733 ntBASIC1.83□□□□□ -2.12
CD40P25942 MIRLET7G-201ENST00000362280 84 ntBASIC1.83□□□□□ -2.12
CD40P25942 SNORD114-1-201ENST00000362705 72 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNU6-647P-201ENST00000364243 107 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNU6-690P-201ENST00000365242 106 ntBASIC1.83□□□□□ -2.12
CD40P25942 SNORD116-14-201ENST00000383894 92 ntBASIC1.83□□□□□ -2.12
CD40P25942 SNORD116-17-201ENST00000383929 92 ntBASIC1.83□□□□□ -2.12
CD40P25942 SNORA24-201ENST00000384096 131 ntBASIC1.83□□□□□ -2.12
CD40P25942 SNORD116-15-201ENST00000384445 92 ntBASIC1.83□□□□□ -2.12
CD40P25942 SNORD116-19-201ENST00000384729 92 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
CD40P25942 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
CD40P25942 RNU7-107P-201ENST00000459121 61 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNU6-1333P-201ENST00000516162 93 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNU6-113P-201ENST00000516653 101 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNU7-53P-201ENST00000516705 60 ntBASIC1.83□□□□□ -2.12
CD40P25942 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNU6-250P-201ENST00000516958 103 ntBASIC1.83□□□□□ -2.12
CD40P25942 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
CD40P25942 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
CD40P25942 HSPE1P19-201ENST00000603327 295 ntBASIC1.83□□□□□ -2.12
CD40P25942 RNU6-349P-201ENST00000362402 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms