Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ERCC3P19447 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
ERCC3P19447 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.39□□□□□ -2.03
ERCC3P19447 SNORD28B-201ENST00000390993 75 ntBASIC2.39□□□□□ -2.03
ERCC3P19447 SNORA40.5-201ENST00000391061 128 ntBASIC2.39□□□□□ -2.03
ERCC3P19447 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.39□□□□□ -2.03
ERCC3P19447 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
ERCC3P19447 AC011603.4-201ENST00000611325 277 ntBASIC2.39□□□□□ -2.03
ERCC3P19447 MIR376A2-201ENST00000636782 80 ntBASIC2.39□□□□□ -2.03
ERCC3P19447 MIR302B-201ENST00000362188 73 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 RNU6-704P-201ENST00000364162 103 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 SNORA40-201ENST00000388090 126 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 SNORA26.9-201ENST00000391322 122 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 MTATP6P21-201ENST00000440681 189 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 RPS26P48-201ENST00000491713 339 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 MIR3198-2-201ENST00000577868 80 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.38□□□□□ -2.03
ERCC3P19447 AL596211.1-201ENST00000569873 2277 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 SNORD1A-201ENST00000364968 72 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 Y_RNA.440-201ENST00000384120 114 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 AL021397.1-201ENST00000451806 248 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 RNU7-197P-201ENST00000458836 62 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 Y_RNA.686-201ENST00000516548 134 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 Y_RNA.690-201ENST00000516603 95 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 RNU6-958P-201ENST00000516995 106 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.37□□□□□ -2.03
ERCC3P19447 AL161722.3-201ENST00000605789 2983 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 MIR6845-201ENST00000613182 61 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 uc_338.20-201ENST00000621563 178 ntBASIC2.37□□□□□ -2.03
ERCC3P19447 SNORD115-34-201ENST00000362441 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-12-201ENST00000362583 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-29-201ENST00000362834 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-9-201ENST00000362912 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-21-201ENST00000362963 81 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-14-201ENST00000363090 81 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-13-201ENST00000363358 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-41-201ENST00000363608 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-11-201ENST00000363616 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-5-201ENST00000363633 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-39-201ENST00000363694 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-4-201ENST00000363810 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-16-201ENST00000363887 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-6-201ENST00000363942 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-42-201ENST00000364273 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 Y_RNA.251-201ENST00000364551 99 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-15-201ENST00000364809 81 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-1-201ENST00000364961 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-26-201ENST00000365067 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-10-201ENST00000365073 81 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-43-201ENST00000365503 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-36-201ENST00000365629 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 Y_RNA.494-201ENST00000384432 111 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 RNU6-1065P-201ENST00000384513 106 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 AL627390.1-201ENST00000396055 340 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 TMSB4XP3-201ENST00000445144 114 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 RNA5SP458-201ENST00000516188 119 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 AL513534.2-201ENST00000603836 250 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 SNORD115-40-201ENST00000606510 82 ntBASIC2.36□□□□□ -2.03
ERCC3P19447 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ERCC3P19447 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
ERCC3P19447 MIR653-201ENST00000385279 96 ntBASIC2.35□□□□□ -2.03
ERCC3P19447 RNU7-80P-201ENST00000459562 61 ntBASIC2.35□□□□□ -2.03
ERCC3P19447 MIR4764-201ENST00000580680 88 ntBASIC2.35□□□□□ -2.03
ERCC3P19447 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 RNU1-133P-201ENST00000364867 167 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 SNORA70.7-201ENST00000384159 133 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 RNU6-257P-201ENST00000410238 98 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 RNU6-1211P-201ENST00000459179 105 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 RPS29P24-201ENST00000486345 171 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 AC008834.1-201ENST00000511612 175 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 SNORD111.1-201ENST00000516421 86 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 RNU7-43P-201ENST00000516554 64 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
ERCC3P19447 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
ERCC3P19447 SNORD33-201ENST00000362761 85 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 Y_RNA.120-201ENST00000363304 110 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 RNA5SP138-201ENST00000365098 114 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 SNORA51.10-201ENST00000384418 136 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 Y_RNA.692-201ENST00000516627 105 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 AL357312.1-201ENST00000603879 298 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 AC243994.1-201ENST00000618627 109 ntBASIC2.33□□□□□ -2.04
ERCC3P19447 RNA5SP160-201ENST00000364866 120 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 Y_RNA.454-201ENST00000384224 113 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 AC019129.1-201ENST00000403786 261 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 MTND4LP9-201ENST00000427694 174 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 AL392103.1-201ENST00000447000 198 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 RNU2-11P-201ENST00000459191 187 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 Y_RNA.757-201ENST00000578934 114 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 MIR4791-201ENST00000607666 84 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 TUG1_4.1-201ENST00000619464 181 ntBASIC2.32□□□□□ -2.04
ERCC3P19447 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.32□□□□□ -2.04
ERCC3P19447 RNU1-17P-201ENST00000363022 152 ntBASIC2.31□□□□□ -2.04
ERCC3P19447 RNU6-309P-201ENST00000364573 106 ntBASIC2.31□□□□□ -2.04
ERCC3P19447 RPL31P63-201ENST00000422565 375 ntBASIC2.31□□□□□ -2.04
ERCC3P19447 AL035398.1-201ENST00000430869 322 ntBASIC2.31□□□□□ -2.04
ERCC3P19447 RPL39P39-201ENST00000455840 151 ntBASIC2.31□□□□□ -2.04
ERCC3P19447 RNU6-717P-201ENST00000459076 104 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms