Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6-541P-201ENST00000384709 110 ntBASIC-2.36□□□□□ -2.79
HMGA1P17096 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-2.36□□□□□ -2.79
HMGA1P17096 AC068339.1-201ENST00000526965 141 ntBASIC-2.36□□□□□ -2.79
HMGA1P17096 AL158209.2-201ENST00000619266 216 ntBASIC-2.36□□□□□ -2.79
HMGA1P17096 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.36□□□□□ -2.79
HMGA1P17096 SNORD115-34-201ENST00000362441 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-29-201ENST00000362834 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-21-201ENST00000362963 81 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-14-201ENST00000363090 81 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-13-201ENST00000363358 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-11-201ENST00000363616 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-5-201ENST00000363633 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-39-201ENST00000363694 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-4-201ENST00000363810 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-16-201ENST00000363887 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-6-201ENST00000363942 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-15-201ENST00000364809 81 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-1-201ENST00000364961 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-10-201ENST00000365073 81 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-43-201ENST00000365503 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-36-201ENST00000365629 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 RNU6-484P-201ENST00000384016 107 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 RNU6-207P-201ENST00000384137 107 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 Z82188.1-201ENST00000436709 154 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 AC098614.3-201ENST00000438957 440 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 MIR3920-201ENST00000581751 86 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 AC022441.3-201ENST00000605737 136 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 SNORD115-40-201ENST00000606510 82 ntBASIC-2.37□□□□□ -2.79
HMGA1P17096 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 MTCO2P29-201ENST00000465212 189 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 RNU7-25P-201ENST00000516544 62 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 AC055872.1-201ENST00000570978 278 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 MIR3941-201ENST00000582572 103 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 MIR4307-201ENST00000582802 84 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 TUSC7.1-201ENST00000610969 165 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 AC009248.2-201ENST00000619826 254 ntBASIC-2.38□□□□□ -2.79
HMGA1P17096 RNU6-164P-201ENST00000364604 103 ntBASIC-2.39□□□□□ -2.79
HMGA1P17096 Y_RNA.407-201ENST00000383986 113 ntBASIC-2.39□□□□□ -2.79
HMGA1P17096 Y_RNA.578-201ENST00000390903 88 ntBASIC-2.39□□□□□ -2.79
HMGA1P17096 SNORD72-201ENST00000390994 80 ntBASIC-2.39□□□□□ -2.79
HMGA1P17096 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.39□□□□□ -2.79
HMGA1P17096 U4.1-201ENST00000620349 87 ntBASIC-2.39□□□□□ -2.79
HMGA1P17096 RNA5SP133-201ENST00000363368 119 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 SNORD115-33-201ENST00000363723 82 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 RNU4-75P-201ENST00000364621 146 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 Y_RNA.323-201ENST00000365157 109 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 RNU6-1264P-201ENST00000383891 107 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 RNU6-434P-201ENST00000384376 107 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 RNU6-476P-201ENST00000384726 107 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 AC244090.1-201ENST00000441884 93 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 RNU6-1003P-201ENST00000517099 105 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 AC245505.1-201ENST00000556398 224 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 AC080013.3-201ENST00000606839 578 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 JPX_2.1-201ENST00000614161 69 ntBASIC-2.4□□□□□ -2.79
HMGA1P17096 RNU6-949P-201ENST00000384040 107 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 MIR521-1-201ENST00000384902 87 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 MIR599-201ENST00000385069 95 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 SNORA40.2-201ENST00000390847 128 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 MIR548I3-201ENST00000408378 149 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 RNU7-13P-201ENST00000516413 62 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 RNU6-1220P-201ENST00000517126 108 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 MTATP6P15-201ENST00000527233 835 ntBASIC-2.41□□□□□ -2.8
HMGA1P17096 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-2.41□□□□□ -2.8
HMGA1P17096 RNU6-433P-201ENST00000363216 104 ntBASIC-2.42□□□□□ -2.8
HMGA1P17096 RNU4-92P-201ENST00000363783 136 ntBASIC-2.42□□□□□ -2.8
HMGA1P17096 RNU4-1-201ENST00000363925 141 ntBASIC-2.42□□□□□ -2.8
HMGA1P17096 Y_RNA.465-201ENST00000384293 102 ntBASIC-2.42□□□□□ -2.8
HMGA1P17096 RNU6-809P-201ENST00000384461 107 ntBASIC-2.42□□□□□ -2.8
HMGA1P17096 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-2.42□□□□□ -2.8
HMGA1P17096 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-2.42□□□□□ -2.8
HMGA1P17096 MIR4460-201ENST00000577862 86 ntBASIC-2.42□□□□□ -2.8
HMGA1P17096 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.42□□□□□ -2.8
HMGA1P17096 AC005828.6-201ENST00000606610 232 ntBASIC-2.42□□□□□ -2.8
HMGA1P17096 Y_RNA.7-201ENST00000362352 102 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 RNA5SP26-201ENST00000362406 119 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 Y_RNA.212-201ENST00000364177 102 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 RNU6-883P-201ENST00000384597 107 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 DLGAP5P1-201ENST00000430307 464 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 MTND4LP18-201ENST00000526864 291 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 U6.109-201ENST00000636749 87 ntBASIC-2.43□□□□□ -2.8
HMGA1P17096 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 Y_RNA.242-201ENST00000364473 110 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 RNY3P9-201ENST00000384727 106 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 RNU6-159P-201ENST00000391080 106 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 AC084290.1-201ENST00000434995 374 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 Y_RNA.683-201ENST00000516508 93 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 ELOCP32-201ENST00000548625 324 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 AC008507.4-201ENST00000585464 127 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 Y_RNA.802-201ENST00000614892 130 ntBASIC-2.44□□□□□ -2.8
HMGA1P17096 RNU6-194P-201ENST00000363862 105 ntBASIC-2.45□□□□□ -2.8
HMGA1P17096 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.45□□□□□ -2.8
HMGA1P17096 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.45□□□□□ -2.8
HMGA1P17096 RNU6-746P-201ENST00000384112 109 ntBASIC-2.45□□□□□ -2.8
HMGA1P17096 RNU6-298P-201ENST00000390888 96 ntBASIC-2.45□□□□□ -2.8
HMGA1P17096 AC127455.1-201ENST00000565496 145 ntBASIC-2.45□□□□□ -2.8
HMGA1P17096 AC064836.2-201ENST00000609491 462 ntBASIC-2.45□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms