Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD8P13378 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD8P13378 HSPE1P9-201ENST00000440046 311 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD8P13378 AC113410.1-201ENST00000505029 247 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 SCARNA23-201ENST00000516060 130 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 AC004812.1-201ENST00000540773 146 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HOXD8P13378 AC131280.1-202ENST00000624067 4211 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 AC009487.2-201ENST00000420969 6821 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 ZNF658B-202ENST00000615961 3375 ntBASIC2.83□□□□□ -1.96
HOXD8P13378 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HOXD8P13378 Y_RNA.10-201ENST00000362371 110 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 SNORA38-201ENST00000363946 132 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 SNORA1.2-201ENST00000365189 134 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 SNORA70.7-201ENST00000384159 133 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 MIR516B2-201ENST00000385190 85 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HOXD8P13378 RNU11-3P-201ENST00000391111 133 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 U8.16-201ENST00000391279 133 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 RNU2-7P-201ENST00000410794 178 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 AL512326.2-201ENST00000426359 151 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 AC092427.1-202ENST00000430569 476 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 PGBD4P5-201ENST00000445958 426 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 RNU7-113P-201ENST00000459273 62 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 SNORA31.10-201ENST00000516482 106 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 MIR6733-201ENST00000635723 61 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 AC016717.2-201ENST00000609089 5141 ntBASIC2.82□□□□□ -1.96
HOXD8P13378 SNORA4.2-201ENST00000365313 147 ntBASIC2.81□□□□□ -1.96
HOXD8P13378 MIR597-201ENST00000384968 97 ntBASIC2.81□□□□□ -1.96
HOXD8P13378 AL359511.1-201ENST00000402970 211 ntBASIC2.81□□□□□ -1.96
HOXD8P13378 RNU7-26P-201ENST00000458980 63 ntBASIC2.81□□□□□ -1.96
HOXD8P13378 RNU7-34P-201ENST00000459394 64 ntBASIC2.81□□□□□ -1.96
HOXD8P13378 RPS23P4-201ENST00000487908 423 ntBASIC2.81□□□□□ -1.96
HOXD8P13378 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.81□□□□□ -1.96
HOXD8P13378 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXD8P13378 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HOXD8P13378 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.8□□□□□ -1.96
HOXD8P13378 MIRLET7C-201ENST00000362160 84 ntBASIC2.8□□□□□ -1.96
HOXD8P13378 RNU6-409P-201ENST00000384114 104 ntBASIC2.8□□□□□ -1.96
HOXD8P13378 RNA5SP492-201ENST00000411330 114 ntBASIC2.8□□□□□ -1.96
HOXD8P13378 RNU7-67P-201ENST00000459003 62 ntBASIC2.8□□□□□ -1.96
HOXD8P13378 RNA5SP168-201ENST00000516642 112 ntBASIC2.8□□□□□ -1.96
HOXD8P13378 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXD8P13378 MIR3202-2-201ENST00000635980 79 ntBASIC2.8□□□□□ -1.96
HOXD8P13378 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HOXD8P13378 RNU6-661P-201ENST00000362409 107 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 RNA5SP456-201ENST00000364002 114 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 Y_RNA.299-201ENST00000364973 94 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 RNU6-573P-201ENST00000383938 106 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 Y_RNA.494-201ENST00000384432 111 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 MIR452-201ENST00000385020 85 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 SNORD77B-201ENST00000391112 67 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 RNU6-733P-201ENST00000410759 104 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 RNU6-893P-201ENST00000458841 100 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 RNU7-45P-201ENST00000459460 63 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 AC026421.1-201ENST00000519101 163 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 MIR3152-201ENST00000579801 74 ntBASIC2.79□□□□□ -1.96
HOXD8P13378 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.79□□□□□ -1.96
HOXD8P13378 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HOXD8P13378 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXD8P13378 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HOXD8P13378 RNU6-833P-201ENST00000363486 107 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 Y_RNA.342-201ENST00000365352 113 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 RNU6-482P-201ENST00000391068 107 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 RNU4-53P-201ENST00000410828 140 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 RN7SKP192-201ENST00000411291 327 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 DEFB122-202ENST00000569013 197 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 MIR3618-201ENST00000580330 88 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 AC103810.6-201ENST00000606708 136 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXD8P13378 AC087741.2-201ENST00000619415 172 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 MIR7111-201ENST00000619751 72 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 MIR1255B1-201ENST00000636325 63 ntBASIC2.78□□□□□ -1.96
HOXD8P13378 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
HOXD8P13378 AC093010.3-201ENST00000570269 15214 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 MIR494-201ENST00000349529 81 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 RNU4-67P-201ENST00000364569 141 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 Y_RNA.370-201ENST00000365589 108 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 Y_RNA.601-201ENST00000410500 113 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 AL591806.2-201ENST00000433122 173 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 RPPH1-2P-201ENST00000516688 293 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 RNU7-53P-201ENST00000516705 60 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 RNU6-958P-201ENST00000516995 106 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 AC092881.1-201ENST00000638218 2733 ntBASIC2.77□□□□□ -1.97
HOXD8P13378 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HOXD8P13378 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
HOXD8P13378 MIR136-201ENST00000385207 82 ntBASIC2.76□□□□□ -1.97
HOXD8P13378 SNORD88.1-201ENST00000408684 91 ntBASIC2.76□□□□□ -1.97
HOXD8P13378 SNORA7.5-201ENST00000410672 110 ntBASIC2.76□□□□□ -1.97
HOXD8P13378 RNU4-69P-201ENST00000410677 143 ntBASIC2.76□□□□□ -1.97
HOXD8P13378 MIR5092-201ENST00000583139 88 ntBASIC2.76□□□□□ -1.97
HOXD8P13378 AC095038.3-201ENST00000634439 195 ntBASIC2.76□□□□□ -1.97
HOXD8P13378 Y_RNA.96-201ENST00000363092 109 ntBASIC2.75□□□□□ -1.97
HOXD8P13378 Y_RNA.171-201ENST00000363760 102 ntBASIC2.75□□□□□ -1.97
HOXD8P13378 MIR1289-2-201ENST00000408360 111 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms