Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC005972.2-201ENST00000604690 348 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 AC011603.4-201ENST00000611325 277 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 MIR6818-201ENST00000621576 65 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 U6.114-201ENST00000636407 96 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 MIR548O-201ENST00000408583 114 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 RNU4-61P-201ENST00000411243 107 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 RNU6-208P-201ENST00000362431 107 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 RNU6-354P-201ENST00000383862 107 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 RNU6-610P-201ENST00000384264 107 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 MIR548I3-201ENST00000408378 149 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 AC012414.2-201ENST00000559474 187 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 AC002044.1-201ENST00000606707 158 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 AL391262.2-201ENST00000622466 494 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 MIR302B-201ENST00000362188 73 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 MIR342-201ENST00000362212 99 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 RNU6-268P-201ENST00000364174 107 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 RNU4-75P-201ENST00000364621 146 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 SNORD70.1-201ENST00000391007 85 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.77□□□□□ -2.53
COL6A3P12111 AC244090.1-201ENST00000441884 93 ntBASIC-0.77□□□□□ -2.53
COL6A3P12111 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.77□□□□□ -2.53
COL6A3P12111 MIR16-2-201ENST00000362117 81 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RNU6-973P-201ENST00000364690 107 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RNU6-641P-201ENST00000384006 107 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 SNORA27-201ENST00000384323 126 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RPS27AP14-201ENST00000422868 454 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 U8.22-201ENST00000459141 133 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 SERF1AP1-201ENST00000514575 187 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 SNORD27.1-201ENST00000516319 72 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL6A3P12111 AC022418.1-201ENST00000624118 445 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 SNORD115-7-201ENST00000365306 82 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 MIR548AE1-201ENST00000583292 70 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 AC005828.6-201ENST00000606610 232 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 AC069503.3-201ENST00000618674 145 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RNU4-58P-201ENST00000363192 141 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RNU6-291P-201ENST00000384720 107 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 MIR548H3-201ENST00000408771 118 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RNU7-79P-201ENST00000516082 62 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 SNORD63.1-201ENST00000516178 80 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 AC072046.2-201ENST00000618366 268 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 MIR6717-201ENST00000622747 73 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 U6.115-201ENST00000636045 103 ntBASIC-0.78□□□□□ -2.53
COL6A3P12111 RNU6-933P-201ENST00000384424 107 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
COL6A3P12111 AL117351.1-201ENST00000438864 766 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
COL6A3P12111 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.79□□□□□ -2.54
COL6A3P12111 AC109347.2-201ENST00000610220 349 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.79□□□□□ -2.54
COL6A3P12111 RNU6-280P-201ENST00000364145 104 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 RNU6-767P-201ENST00000384132 107 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 RNU6-476P-201ENST00000384726 107 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 MIR521-1-201ENST00000384902 87 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 MIRLET7B-201ENST00000385140 83 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 RNU2-14P-201ENST00000411053 191 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 RNU7-138P-201ENST00000459479 64 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 RNU6-693P-201ENST00000516134 107 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 AC018714.1-201ENST00000605028 208 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 RNU6-85P-201ENST00000605989 107 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 AC064836.2-201ENST00000609491 462 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 TUSC7.1-201ENST00000610969 165 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 AC087683.2-201ENST00000611384 326 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 AL445984.1-201ENST00000637834 659 ntBASIC-0.79□□□□□ -2.54
COL6A3P12111 SNORD115-23-201ENST00000364461 82 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-434P-201ENST00000384376 107 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 SNORA40.5-201ENST00000391061 128 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 SEPT14P24-201ENST00000447236 180 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-412P-201ENST00000516434 106 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.8□□□□□ -2.54
COL6A3P12111 AC007671.2-201ENST00000637344 619 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-128P-201ENST00000383976 107 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-429P-201ENST00000384582 108 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 MIR29B1-201ENST00000385015 81 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.8□□□□□ -2.54
COL6A3P12111 USP9YP23-201ENST00000455085 407 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 SNORA25.10-201ENST00000515926 124 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 AC084290.1-201ENST00000434995 374 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 MTND1P12-201ENST00000455231 147 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.8□□□□□ -2.54
COL6A3P12111 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.8□□□□□ -2.54
COL6A3P12111 RNU6-531P-201ENST00000516694 104 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms