Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 AC105081.1-201ENST00000617727 106 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 RNU4-20P-201ENST00000365601 151 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 MTCO3P40-201ENST00000392516 676 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 AL353193.1-201ENST00000421444 268 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 RNU7-96P-201ENST00000459535 64 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 AC124312.5-201ENST00000604451 268 ntBASIC-0.65□□□□□ -2.51
FREM3P0C091 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.66□□□□□ -2.52
FREM3P0C091 SNORA69.1-201ENST00000390904 137 ntBASIC-0.66□□□□□ -2.52
FREM3P0C091 BX276092.1-201ENST00000427368 251 ntBASIC-0.66□□□□□ -2.52
FREM3P0C091 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.66□□□□□ -2.52
FREM3P0C091 SCARNA17-201ENST00000516183 144 ntBASIC-0.66□□□□□ -2.52
FREM3P0C091 RNU6-256P-201ENST00000516747 97 ntBASIC-0.66□□□□□ -2.52
FREM3P0C091 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.66□□□□□ -2.52
FREM3P0C091 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 RNU2-66P-201ENST00000410650 161 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 AC107297.1-201ENST00000459991 176 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 RNU7-115P-201ENST00000516433 55 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 DEFB131E-201ENST00000532329 154 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.67□□□□□ -2.52
FREM3P0C091 AP001282.2-201ENST00000616149 309 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 MIR198-201ENST00000637333 62 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 RNA5SP237-201ENST00000410414 113 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 CHEK2P4-201ENST00000450340 246 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.67□□□□□ -2.52
FREM3P0C091 U7.6-201ENST00000610841 64 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 AC122108.2-201ENST00000611946 526 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 AL442067.1-201ENST00000613261 223 ntBASIC-0.67□□□□□ -2.52
FREM3P0C091 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
FREM3P0C091 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 RNU6-10P-201ENST00000384036 107 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 FCF1P4-201ENST00000448326 183 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 AC138749.4-201ENST00000563970 127 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 AL133255.1-201ENST00000606374 441 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 MIR6514-201ENST00000622549 70 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 RNU6-373P-201ENST00000411247 98 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.68□□□□□ -2.52
FREM3P0C091 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 RNU6-966P-201ENST00000516479 104 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 AP003733.2-201ENST00000529409 171 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 AC018462.2-201ENST00000605375 395 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 AC124864.2-201ENST00000624736 186 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 MIR3662-201ENST00000637030 95 ntBASIC-0.68□□□□□ -2.52
FREM3P0C091 MIR342-201ENST00000362212 99 ntBASIC-0.69□□□□□ -2.52
FREM3P0C091 RNU4-58P-201ENST00000363192 141 ntBASIC-0.69□□□□□ -2.52
FREM3P0C091 RNU6-99P-201ENST00000364721 107 ntBASIC-0.69□□□□□ -2.52
FREM3P0C091 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-273P-201ENST00000516937 96 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-490P-201ENST00000362985 107 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-597P-201ENST00000365620 102 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 MIR196A1-201ENST00000388006 70 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-938P-201ENST00000411285 103 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 AC074085.1-201ENST00000413598 418 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 MTND4P28-201ENST00000426217 387 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.7□□□□□ -2.52
FREM3P0C091 RNU6-874P-201ENST00000362390 105 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU4-84P-201ENST00000364200 139 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 MIR617-201ENST00000385030 97 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 SNORD83B-201ENST00000386745 93 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 SNORD78.2-201ENST00000391076 69 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU6-864P-201ENST00000516256 108 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 MIR4752-201ENST00000579672 72 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 SNORA63.5-201ENST00000363548 123 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU6-553P-201ENST00000364047 96 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU6-449P-201ENST00000383914 107 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU6-926P-201ENST00000384075 107 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNY3P4-201ENST00000384428 101 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 SNORA72.6-201ENST00000384520 129 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 SNORD77.3-201ENST00000391113 65 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 AF228730.4-201ENST00000421457 183 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 RNU1-54P-201ENST00000517181 120 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 AC245008.1-201ENST00000608123 476 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 MIR1244-1-201ENST00000612829 85 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.71□□□□□ -2.52
FREM3P0C091 MIR1244-3-201ENST00000635744 85 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms