Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MIR548A2-201ENST00000384956 97 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 SNORA75.5-201ENST00000391291 81 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 RN7SKP200-201ENST00000410564 320 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 RPL30P13-201ENST00000418873 348 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 AC244636.1-201ENST00000421152 228 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 MTND4LP9-201ENST00000427694 174 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 AC093850.1-201ENST00000454121 251 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 RNA5SP168-201ENST00000516642 112 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 RNA5SP102-201ENST00000516865 106 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 MIR4662B-201ENST00000579498 81 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.66□□□□□ -2.14
HOXC6P09630 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXC6P09630 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 RNU6-508P-201ENST00000363231 103 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 RNU6-268P-201ENST00000364174 107 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 SNORA25.7-201ENST00000364375 127 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 snoU2-30.1-201ENST00000365012 70 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 RNU6-1031P-201ENST00000384773 107 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 MIR802-201ENST00000390235 94 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HOXC6P09630 SNRPGP14-201ENST00000435400 219 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXC6P09630 RNA5SP57-201ENST00000459463 123 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 RNU6-504P-201ENST00000516568 104 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 RNU7-28P-201ENST00000516759 62 ntBASIC1.65□□□□□ -2.15
HOXC6P09630 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.65□□□□□ -2.15
HOXC6P09630 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HOXC6P09630 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.64□□□□□ -2.15
HOXC6P09630 SNORD14E-201ENST00000364009 85 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 RNU6-53P-201ENST00000365367 106 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 RNU6-81P-201ENST00000365608 104 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 SNORA26-201ENST00000391286 122 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXC6P09630 AF228730.3-201ENST00000436691 102 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 AC069257.2-201ENST00000441819 155 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 RNU7-34P-201ENST00000459394 64 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 RNU7-25P-201ENST00000516544 62 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 RNU6-971P-201ENST00000516920 106 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXC6P09630 SNORA28-201ENST00000606769 126 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 AC021506.2-201ENST00000612354 169 ntBASIC1.64□□□□□ -2.15
HOXC6P09630 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC6P09630 Y_RNA.191-201ENST00000363972 113 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 Y_RNA.294-201ENST00000364916 102 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 RNU6-442P-201ENST00000383968 104 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 MIR518F-201ENST00000384973 87 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HOXC6P09630 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 AL034345.1-201ENST00000407768 123 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 RNU6-1211P-201ENST00000459179 105 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 snoU13.27-201ENST00000459278 104 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 AC099513.1-201ENST00000490423 301 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 RNU7-12P-201ENST00000516030 62 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 Y_RNA.686-201ENST00000516548 134 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 AC090142.3-201ENST00000519012 385 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 AC022254.1-201ENST00000567857 235 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 AC087685.1-201ENST00000587507 141 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 MIR376A2-201ENST00000636782 80 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC6P09630 MTND5P32-201ENST00000560711 1802 ntBASIC1.63□□□□□ -2.15
HOXC6P09630 RNU6-888P-201ENST00000363010 101 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 SNORA40-201ENST00000388090 126 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 SNORD77.3-201ENST00000391113 65 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 MIR1304-201ENST00000408243 91 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 MIR548O-201ENST00000408583 114 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXC6P09630 SNORA18.4-201ENST00000516440 124 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 MIR4709-201ENST00000577272 72 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 MIR4778-201ENST00000577635 80 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 MIR4452-201ENST00000583004 71 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 AC006441.5-201ENST00000612680 209 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.62□□□□□ -2.15
HOXC6P09630 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HOXC6P09630 RNU6-915P-201ENST00000364943 103 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 SNORD24-201ENST00000383884 75 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 RNU6-203P-201ENST00000384038 104 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 Y_RNA.547-201ENST00000384654 119 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 Y_RNA.584-201ENST00000391090 114 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXC6P09630 CYCTP-201ENST00000504253 315 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 RNU6-1234P-201ENST00000516877 103 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 RNU2-60P-201ENST00000517290 128 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 MIR4713-201ENST00000582691 75 ntBASIC1.61□□□□□ -2.15
HOXC6P09630 Y_RNA.336-201ENST00000365307 109 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 RNU6-959P-201ENST00000384671 107 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 RNU6-126P-201ENST00000516685 103 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 AL365205.2-201ENST00000594586 68 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 AC015726.2-201ENST00000620112 122 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 AC095038.3-201ENST00000634439 195 ntBASIC1.6□□□□□ -2.15
HOXC6P09630 Y_RNA.52-201ENST00000362760 96 ntBASIC1.59□□□□□ -2.15
HOXC6P09630 Y_RNA.218-201ENST00000364218 104 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms