Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL442644.1-201ENST00000454390 3105 ntBASIC1.35□□□□□ -2.19
MMP2P08253 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
MMP2P08253 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
MMP2P08253 Y_RNA.66-201ENST00000362862 102 ntBASIC1.34□□□□□ -2.19
MMP2P08253 Y_RNA.634-201ENST00000364811 113 ntBASIC1.34□□□□□ -2.19
MMP2P08253 RNU5E-9P-201ENST00000411164 104 ntBASIC1.34□□□□□ -2.19
MMP2P08253 AC009474.2-201ENST00000451383 136 ntBASIC1.34□□□□□ -2.19
MMP2P08253 AC074198.2-201ENST00000508153 258 ntBASIC1.34□□□□□ -2.19
MMP2P08253 RNU6-693P-201ENST00000516134 107 ntBASIC1.34□□□□□ -2.19
MMP2P08253 RNU6-197P-201ENST00000516680 100 ntBASIC1.34□□□□□ -2.19
MMP2P08253 MRPS18CP4-201ENST00000535821 231 ntBASIC1.34□□□□□ -2.19
MMP2P08253 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
MMP2P08253 FTX_2.1-201ENST00000618816 94 ntBASIC1.34□□□□□ -2.19
MMP2P08253 Y_RNA.23-201ENST00000362496 106 ntBASIC1.33□□□□□ -2.2
MMP2P08253 Y_RNA.240-201ENST00000364469 95 ntBASIC1.33□□□□□ -2.2
MMP2P08253 RNU6-643P-201ENST00000384018 107 ntBASIC1.33□□□□□ -2.2
MMP2P08253 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
MMP2P08253 MIR548A2-201ENST00000384956 97 ntBASIC1.33□□□□□ -2.2
MMP2P08253 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
MMP2P08253 U8.17-201ENST00000391292 132 ntBASIC1.33□□□□□ -2.2
MMP2P08253 SNORA79-201ENST00000408376 140 ntBASIC1.33□□□□□ -2.2
MMP2P08253 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.33□□□□□ -2.2
MMP2P08253 RNA5SP153-201ENST00000516498 76 ntBASIC1.33□□□□□ -2.2
MMP2P08253 RNU6-504P-201ENST00000516568 104 ntBASIC1.33□□□□□ -2.2
MMP2P08253 RNU6-182P-201ENST00000516970 105 ntBASIC1.33□□□□□ -2.2
MMP2P08253 RNU6-1270P-201ENST00000517128 108 ntBASIC1.33□□□□□ -2.2
MMP2P08253 RNU6-165P-201ENST00000517170 99 ntBASIC1.33□□□□□ -2.2
MMP2P08253 RNU7-181P-201ENST00000517234 74 ntBASIC1.33□□□□□ -2.2
MMP2P08253 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
MMP2P08253 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
MMP2P08253 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
MMP2P08253 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.33□□□□□ -2.2
MMP2P08253 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MMP2P08253 SNORD24-201ENST00000383884 75 ntBASIC1.32□□□□□ -2.2
MMP2P08253 MIR518F-201ENST00000384973 87 ntBASIC1.32□□□□□ -2.2
MMP2P08253 MIR520C-201ENST00000385005 87 ntBASIC1.32□□□□□ -2.2
MMP2P08253 SNORD28B-201ENST00000390993 75 ntBASIC1.32□□□□□ -2.2
MMP2P08253 PCNPP3-201ENST00000393579 471 ntBASIC1.32□□□□□ -2.2
MMP2P08253 SEPT7P4-201ENST00000437076 306 ntBASIC1.32□□□□□ -2.2
MMP2P08253 RPL39P39-201ENST00000455840 151 ntBASIC1.32□□□□□ -2.2
MMP2P08253 RNU4-57P-201ENST00000515980 135 ntBASIC1.32□□□□□ -2.2
MMP2P08253 AC007751.1-201ENST00000529260 376 ntBASIC1.32□□□□□ -2.2
MMP2P08253 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.32□□□□□ -2.2
MMP2P08253 MIR548AR-201ENST00000582191 57 ntBASIC1.32□□□□□ -2.2
MMP2P08253 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
MMP2P08253 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MMP2P08253 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
MMP2P08253 Y_RNA.150-201ENST00000363562 102 ntBASIC1.31□□□□□ -2.2
MMP2P08253 MT-TR-201ENST00000387439 65 ntBASIC1.31□□□□□ -2.2
MMP2P08253 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.31□□□□□ -2.2
MMP2P08253 MIR1287-201ENST00000408492 90 ntBASIC1.31□□□□□ -2.2
MMP2P08253 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.31□□□□□ -2.2
MMP2P08253 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.31□□□□□ -2.2
MMP2P08253 RNU7-43P-201ENST00000516554 64 ntBASIC1.31□□□□□ -2.2
MMP2P08253 MIR4764-201ENST00000580680 88 ntBASIC1.31□□□□□ -2.2
MMP2P08253 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
MMP2P08253 AC098479.1-201ENST00000609225 154 ntBASIC1.31□□□□□ -2.2
MMP2P08253 AL096861.1-201ENST00000610899 123 ntBASIC1.31□□□□□ -2.2
MMP2P08253 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
MMP2P08253 RNU6-888P-201ENST00000363010 101 ntBASIC1.3□□□□□ -2.2
MMP2P08253 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
MMP2P08253 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
MMP2P08253 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
MMP2P08253 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
MMP2P08253 TRMT112P2-201ENST00000512910 132 ntBASIC1.3□□□□□ -2.2
MMP2P08253 Y_RNA.662-201ENST00000516028 97 ntBASIC1.3□□□□□ -2.2
MMP2P08253 MIR4431-201ENST00000579990 94 ntBASIC1.3□□□□□ -2.2
MMP2P08253 MIR3192-201ENST00000584920 77 ntBASIC1.3□□□□□ -2.2
MMP2P08253 MIR8065-201ENST00000620577 100 ntBASIC1.3□□□□□ -2.2
MMP2P08253 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
MMP2P08253 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
MMP2P08253 SNORD115-28-201ENST00000363931 81 ntBASIC1.29□□□□□ -2.2
MMP2P08253 RNU6-312P-201ENST00000364629 107 ntBASIC1.29□□□□□ -2.2
MMP2P08253 Y_RNA.555-201ENST00000384673 110 ntBASIC1.29□□□□□ -2.2
MMP2P08253 MIR570-201ENST00000384917 97 ntBASIC1.29□□□□□ -2.2
MMP2P08253 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.29□□□□□ -2.2
MMP2P08253 AC006461.1-201ENST00000412637 326 ntBASIC1.29□□□□□ -2.2
MMP2P08253 RNU7-41P-201ENST00000515917 61 ntBASIC1.29□□□□□ -2.2
MMP2P08253 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.29□□□□□ -2.2
MMP2P08253 RNU6-978P-201ENST00000364371 103 ntBASIC1.28□□□□□ -2.2
MMP2P08253 SNORA1.2-201ENST00000365189 134 ntBASIC1.28□□□□□ -2.2
MMP2P08253 Y_RNA.370-201ENST00000365589 108 ntBASIC1.28□□□□□ -2.2
MMP2P08253 RNU6-886P-201ENST00000384319 105 ntBASIC1.28□□□□□ -2.2
MMP2P08253 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
MMP2P08253 Y_RNA.37-201ENST00000362606 108 ntBASIC1.27□□□□□ -2.21
MMP2P08253 RNU4-84P-201ENST00000364200 139 ntBASIC1.27□□□□□ -2.21
MMP2P08253 Y_RNA.270-201ENST00000364693 104 ntBASIC1.27□□□□□ -2.21
MMP2P08253 SNORA1-201ENST00000384107 130 ntBASIC1.27□□□□□ -2.21
MMP2P08253 Y_RNA.441-201ENST00000384123 112 ntBASIC1.27□□□□□ -2.21
MMP2P08253 RNU6-1067P-201ENST00000384752 107 ntBASIC1.27□□□□□ -2.21
MMP2P08253 AC048334.1-201ENST00000477975 159 ntBASIC1.27□□□□□ -2.21
MMP2P08253 AC005840.1-201ENST00000498412 377 ntBASIC1.27□□□□□ -2.21
MMP2P08253 AC107027.2-201ENST00000512197 115 ntBASIC1.27□□□□□ -2.21
MMP2P08253 MIR378D2-201ENST00000580636 98 ntBASIC1.27□□□□□ -2.21
MMP2P08253 AC134878.1-201ENST00000619901 243 ntBASIC1.27□□□□□ -2.21
MMP2P08253 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
MMP2P08253 AC008133.2-201ENST00000624540 351 ntBASIC1.27□□□□□ -2.21
MMP2P08253 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
MMP2P08253 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
MMP2P08253 Y_RNA.241-201ENST00000364470 117 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms